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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatgctatactctttccttttccccactacaatattgcattcattccattaatttggcttataaatgagtatatattctgactttgttattaatgtggttaatttatgatggtatgatataataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG

Basic information

species Glycine max
transcript GLYMA05G37730.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA05G37730.1 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os04g47220.1 (Oryza sativa), 3'ss of exon 1
gtatgctatactctttccttttccccactacaatattgcattcattccattaatttggcttataaatgagtatatattctgactttgttattaatgtggttaatttatga--tggtatgatataataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
                               | |||  ||   | | |   | |   | ||  | |   | |  |||| | ||| | || | |  ||| || |||| ||   |  | ||    |        ||||  | || ||||| || ||||| ||||| ||||||||||| ||| |||| ||||| |||||||| || || ||||| |||||||| ||||| || || |
----------------------------gttagtataccaactactactgcagtaaagatt-cagagatggaagtatttttactgttttctga--gtgattgatttttgttttaatttgcgcgatcttccacagATCCTTGCCCCACTGCCAATCGGGTTTGCGGTGTTCTTGGTTCACCTGGCCACCATCCCCATCACCGGCACCGGCATCAACCCAGCGAGGAGCCTTGGCG

upper sequence: GLYMA05G37730.1 (Glycine max), 3'ss of exon 2
lower sequence: AC209208.3_FGT002 (Zea mays), 3'ss of exon 2
gtatgctatactctttccttttccccactacaatattgcattcattccattaatttggcttataaatgagtatatattctgactttgttattaatgtggttaatttatgatggtatgatataataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
                                 | || ||   | |  |  |  |  || ||    |   || ||||| |   | |  | ||||        ||  ||||     | || |  | |    ||||  | || ||||| || || || || || |||||| |||||||| | || ||||| ||||| || || |||||||| |||||||||||||| || || |
--------------------------------gtgtttcaacaaattgaaaatgtatgcatactcttcgatacatatttttcatattgtgttaagacttacgatgaatgaaacccttatttggtgaaaacagATCCTTGCCCCACTGCCAATTGGGTTCGCGGTGTTCCTGGTCCACCTTGCCACCATCCCCATTACTGGCACTGGCATCAACCCAGCTAGGAGCCTTGGCG

upper sequence: GLYMA05G37730.1 (Glycine max), 3'ss of exon 2
lower sequence: Vv15s0046g02410.t01 (Vitis vinifera), 3'ss of exon 2
gtatgctatactctttccttttccccactacaatattgcattcattccattaatttggcttataaatgagtatatattctgactttgttattaatgtggttaatttatgatggtatgatataataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
                                |  |  | ||     |     |||     |||  |||| || ||||  || |  | | | ||  ||    |    | ||  |     |    || || ||||||||||||| || || || || ||||| ||||||||||| ||  |||| ||||| |||||||| ||||| ||||| ||||| |||||||||||||| |
-------------------------------gacgtcccctttcgctctcatttttcaaccatacctgagaat-tattacgaatgggatctgaaaatgacacaccctttattttccctgaattgaactgcagATTTTGGCTCCTCTCCCGATTGGGTTTGCAGTGTTCTTGGTTCATCTGGCAACCATCCCCATCACCGGAACCGGCATCAACCCTGCTAGGAGTCTCGGGG

upper sequence: GLYMA05G37730.1 (Glycine max), 3'ss of exon 2
lower sequence: Vv02s0025g03390.t01 (Vitis vinifera), 3'ss of exon 2
gtatgctatactctttccttttccccactacaatattgcattcattccattaatttggcttataaatgagtatatattctgactttgttattaatgtggttaatttatgatggtatgatataataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
                  |||||     ||   ||  |  |   | ||||||  | |   | | ||  |||    || |  |  |||           ||||   ||    |  ||  |  ||||  || |||||||||| || || ||||| || ||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||
------------------ttttctttggta-gttagagggtagttaccatta-ctagaaatgtgaacaagt-cccatacaaatcttg----------agttacccta-accgaaattcttgaatatatgcagATTTTGGCCCCCCTCCCCATTGGGTTTGCAGTGTTCTTGGTTCACTTGGCCACCATCCCCATCACAGGAACTGGCATTAACCCAGCCAGGAGTCTTGGAG

upper sequence: GLYMA05G37730.1 (Glycine max), 3'ss of exon 2
lower sequence: Vv15s0046g02420.t01 (Vitis vinifera), 3'ss of exon 2
gtatgctatactctttccttttccccactacaatattgcattcattccattaatttggcttataaatgagtatatattctgactttgttattaatgtggttaatttatgatggtatgatataataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
                | |||||| | |    || || ||  ||||||  | ||     |||| | ||   ||    |||||   |   |     |   || |||| |  ||   |||       | || ||||||||||||| || ||||| || ||||| ||||||||||| ||  |||| ||||| |||||||| ||||| ||||| ||||| ||||||||||| || |
---------------ccattttcctctc----atttttcaaccattcc--tgatggtatttattattgcaaatgggatctgaaaataaca----cgccctttatttttcctgcgttga-------actgcagATTTTGGCTCCTCTCCCCATTGGGTTTGCAGTGTTCTTGGTTCATCTGGCAACCATCCCCATCACCGGAACCGGCATCAACCCTGCTAGGAGTCTGGGGG

upper sequence: GLYMA05G37730.1 (Glycine max), 3'ss of exon 2
lower sequence: PP1S1_535V6.2 (Physcomitrella patens), 3'ss of exon 2
gtatgctatactctttccttttccccactacaatattgcattcattccattaatttggcttataaatgagtatatattctgactttgttattaatgtggttaatttatgatggtatgatataataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
||  | || ||||  |  |      || | || |  |  |||    |   | |   |  |  |   |||   |   | ||  | |     |||   ||||      |||||| | |   ||   | ||| || |  | || || |||||||||||||| || || ||| |||| |||||||| |||||||||||||| ||||||||||| ||||| ||  | ||||| || |
gtgag-tacactccgtt-tccggtgcagttcagttctagattaccgcgcctgagacg--tgctggctgatctttggtact--cctcacagttag-atggtctcaaaatgatgctcttcgatgg-acttgcagGTGCTTGCGCCTCTTCCCATCGGATTCGCAGTTTTCCTGGTGCACTTGGCCACCATTCCCATCACCGGAACTGGCATCAACCCCGCCCGTAGTCTAGGTG

upper sequence: GLYMA05G37730.1 (Glycine max), 3'ss of exon 2
lower sequence: PP1S305_12V6.1 (Physcomitrella patens), 3'ss of exon 2
gtatgctatactctttccttttccccactacaatattgcattcattccattaatttggct-tataaatgagtatatattctgactttgttattaatgtggttaatttatgatggtatgatataataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
                               || | ||     |    | ||   |  |  |||     || | |   | ||| |   | |  ||  |  |    | |  |  || || | |  |   || || | ||||| || ||||||||||||||||| |||||| |||| |||||||| |||||||||||||| || ||  |||| ||||||||| | |||||||| |
-----------------------------ggaagactgtggctagctaagtatcgtaacaatatcttacagca-aggctttgaatgactgagaaacataatct-ctgaccaccgtctgttgt--ttcgtgcagTTGTTGGCACCTCTTCCCATCGGATTTGCAGTGTTCCTGGTGCACTTGGCCACCATTCCCATCACTGGTACAAGCATCAACCCAGCTCGCAGTCTCGGCG

upper sequence: GLYMA05G37730.1 (Glycine max), 3'ss of exon 2
lower sequence: PP1S102_107V6.1 (Physcomitrella patens), 3'ss of exon 2
gtatgctatactctttc-cttttccccactacaat-attgcattcattcca---ttaatttggcttataaatgagtatat--attctgactt--tgttattaatgtggttaatttatgatggta--------------tgatataataa------------------ttgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
||||| |  |||  ||| |  |    || | |||| |  |      ||  |   |  || ||  |||| | ||| |  ||    ||||| ||  || |    | |   | ||   || |   ||              ||| | || ||                  ||| || |  | || || ||||| || ||||| || |||||  |||| || ||||| |||||||||||||| ||||||||||||||||| ||  | ||||| || |
gtatgtttcacttattcacggtggtacatttcaattacagggaaagttggagggtggatgtgttttatcactgatttaatcagatctgaattgctgctgacgacgacataaaaaaataaaaataaaaataaaaaaaactgaaacaaaaaaaataaaaactcttcgtcttgcagGTGCTTGCCCCTCTTCCTATTGGATTCGCAGTGTTTCTGGTACATTTGGCCACCATTCCCATCACCGGAACTGGCATTAACCCTGCACGTAGTCTGGGCG

upper sequence: GLYMA05G37730.1 (Glycine max), 3'ss of exon 2
lower sequence: EFJ18960 (Selaginella moellendorffii), 3'ss of exon 2
--------------------------------------------------gtatgctatactctttccttttccccactacaatatt----gcattcattccattaatttggcttataaatgagtatatattctgactttgttattaatgtggttaatttatgatg-------gtatgatataataatt---gtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
                                                   | |||| | ||  ||| | |   |   |    | ||    |  ||  || |  || ||   |||||   |     ||| |  |  | |  | ||  ||    ||||  |||| |          |   | |    |||     || |||||||||||||||| ||||| ||||| |||||| | |||||| | || || || |||||||| || || ||||| ||||||||  | ||||||||  
gtacgtttcttcttccatccaaagctttggttgattcccctctcatgaagttttgcttttcttcttcttatcttcttgtgtggttttcctagtttttcttgctgtacttcctcttatct-tctccttatctcttctcctcctcatggatagatttaagatatgttccaagctcacaaactttggcgatttctacagCTTTTGGCTCCACTTCCAATCGGGTTTGCGGTGTTCCTCGTCCACCTTGCCACGATCCCCATCACTGGCACGGGCATCAACCCAGCGCGAAGTCTCGGCT

upper sequence: GLYMA05G37730.1 (Glycine max), 3'ss of exon 2
lower sequence: EFJ11572 (Selaginella moellendorffii), 3'ss of exon 2
----------------------------------------------------gtatgctatactctttccttttccccactacaatatt----gcattcattccattaatttggcttataaatgagtatatattctgactttgttattaatgtggttaatttatgatg-------gtatgatataataatt---gtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
                                                     | | || | ||  ||| | |   |   |    | ||    |  ||  || |  || ||   |||||   |     ||| |  |  | |  | ||  ||    ||||  |||| |          |   | |    |||     || |||||||||||||||| ||||| ||||| |||||| | |||||| | || || || |||||||| || || ||||| ||||||||  | ||||||||  
gtacgtttctccttccatccaaagctttggttgattcccccctctcatgaagttttacttttcttcttcttatcttcttgtgtggttttcctagtttttcttgctgtacttcctcttatct-tctccttatctcttctcctcctcatggatagatttaagatatgttccaagctcacaaactttggcgatttctacagCTTTTGGCTCCACTTCCAATCGGGTTTGCGGTGTTCCTCGTCCACCTTGCCACGATCCCCATCACTGGCACGGGCATCAACCCAGCGCGAAGTCTCGGCT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208265750|gb|GE062237.1|GE062237
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCAC
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCAC
EST: gi|22930616|gb|BU547763.1|BU547763
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|151410226|gb|EV280041.1|EV280041
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|209706286|gb|BW680673.1|BW680673
EST:     ACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: ACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|192311795|gb|FK003166.1|FK003166
EST:     TTTTCTCTGCCACTGATGCCAAAAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|7284289|gb|AW596883.1|AW596883
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTACCATCGGATTTGCTGTGTNCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|209718916|gb|BW669105.1|BW669105
EST:     CTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: CTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|151397692|gb|EV267565.1|EV267565
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|8826812|gb|BE210542.1|BE210542
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|193546812|gb|FK501365.1|FK501365
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGA
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGA
EST: gi|31466018|gb|CD408046.1|CD408046
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|31309774|gb|CD394977.1|CD394977
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|208190673|gb|GD988717.1|GD988717
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTACCAACTTACCCATCGGATTTGCTAGTGTTCTTGGTCCAC
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCT-CCA-CTT-CCCATCGGATTTGCT-GTGTTCTTGGTCCAC
EST: gi|192330652|gb|FK022293.1|FK022293
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTG
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTG
EST: gi|192311794|gb|FK003165.1|FK003165
EST:     TTTTCTCTGCCACTGATGCCAAAAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|192312711|gb|FK003951.1|FK003951
EST:     TTTCCTCTGCCACTGATGCCAAAAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTC-TCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|208141616|gb|GD939164.1|GD939164
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTTCTTTGGTCCACTTGG
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTT-CTT-GGTCCACTTGG
EST: gi|58018784|gb|CX705526.1|CX705526
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|208254760|gb|GE051250.1|GE051250
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCAC
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCAC
EST: gi|12773007|gb|BG237934.1|BG237934
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGAGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|10255191|gb|BE822957.1|BE822957
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|58019012|gb|CX705754.1|CX705754
EST:     AGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: AGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|31468418|gb|CD410446.1|CD410446
EST:     TTTTCTCTGCCACTGATGCCAAGAGATACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|31466112|gb|CD408140.1|CD408140
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|151394316|gb|EV264187.1|EV264187
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|38192130|gb|CF921336.1|CF921336
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|16343679|gb|BI969274.1|BI969274
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|192312257|gb|FK003950.1|FK003950
EST:     TTTTCTCTGCCACTGATGCCAAAAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|6726492|gb|AW310846.1|AW310846
EST:     TTTTCTCTGCCATTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|12771996|gb|BG236923.1|BG236923
EST:     GTTTCTGTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTCCCT                         ATTTTGGCTCCACTTCCCATCGGATGTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCTgtatgctata ... ataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tctgactttgttattaatgtggttaatttatgatggtatgatataataattgtagATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
                      ttaatttatgatggta  TA-rich tract