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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaggtgccttagcatttatcacgaatcatcttcgttcgttagggttacgtctcgttgaacaatgaatcttacctttcgttggtgtttatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGATCGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC

Basic information

species Glycine max
transcript GLYMA05G37470.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA05G37470.1 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os04g35090.1 (Oryza sativa), 3'ss of exon 2
gtaggtgcc-ttagcatttatcacga-atcatcttcgt-tcgttagggttacgtctcgttgaacaatgaatcttacctttcg-ttggtgttta----tggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGATCGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC
      ||  || |  | | |||  | | | |   | |  |   ||| | |           |   |   |  |   |||   ||||||| |     || ||||||||||||    |  || |||||||||| |||  |||| ||||||||  ||||||| |||||||| ||||||||||| ||||| |||||||| ||||||||
-----cgctgttggtgtatgtcagtacagcgttcgcatgccaagaggctcaaactgaaagtgattgtaggtgctggttttaacttggtgtatgctgttgttgcagAGGGAGTGCTGTATGCCAAGAAGGACTACAACCTGGCGAAGCACCCGCAGATCGATGTGCCGAACCTGCAGGTGATCAAGCTCATGCAGAGCTTCAAGTC

upper sequence: GLYMA05G37470.1 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os01g73160.1 (Oryza sativa), 3'ss of exon 2
gtaggtgccttagcatttatcacgaatcatcttcgttcgttag-ggttacgtctcgttgaacaatgaatcttacctttcgttggtgtttatggt--gcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGATCGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC
  | ||    |   |||  ||| | ||   ||     | | |  | |     ||   |     |||| |   |    |  ||    |  |   |  ||||||||||| |  |  || |||||||||| |||  |||||||||||||  || | || ||||| ||  || ||||||||||||| |||||||| ||||||||
acatgttttatttgattggtcatgtatttgctgaaggcctgaatgatggtacctttatttgttatgagttgaagtgctaatttaattcaactatatgcagAGGGAGTCTTGTATGCCAAGAAGGACTACAACCTGGCCAAGCACCCAAAGGTTGATGTGCCCAACTTGGAGGTGATTAAGCTCATGCAGAGCTTCAAGTC

upper sequence: GLYMA05G37470.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G171484_T01 (Zea mays), 3'ss of exon 2
---------------------------------------------------------------------gtaggtgccttagcatttatcacga--atcatcttcgttcgttagggttacgtctcgttgaacaatgaatcttacctt-----tcgttggtgtttatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGATCGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC
                                                                      ||| | ||    ||   || || |  || | |    ||||    |  |||| | |             |||||  ||      ||||    |||||| ||||||||| |||   |  || |||||||||| |||  |||||||||||||  || | |||||||| || ||| ||||||||||||| |||||||| ||||||||
gtgagctccttctcctccctcttcgcccgtccccctaggcgcgcccaatataagattatttcattagatttagataccaattcagacattacaagcattagcaatattcggatcgtgtacgacccaagcccgtccttgtcttagattgagaaccgttcaactttatgttgcagAGGGGGTTCTATATGCCAAGAAGGACTACAACCTGGCCAAGCACCCCAAGCTTGACGTGCCCAACCTGGAGGTGATTAAGCTCATGCAGAGCTTCAAGTC

upper sequence: GLYMA05G37470.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G446960_T01 (Zea mays), 3'ss of exon 2
-----gtaggtgccttagcatttatcacgaatcatcttcgttcgttagggttacgtctcgttgaacaatgaatct-tacctttcgttggt--gtttatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGATCGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC
      ||   || |||||| |  ||    || || | ||  | |    |||    || |||  |   ||||  | ||  |     || |    ||||||||||||||| || |  | ||| |||||||||| |||  |||||||||||||  || | || ||||| ||  || ||||||||||||| |||||||| ||||||||
agacattatacgcattagcaatattcgt--attatgtacgaccct---agtttatccttgttttaggttgaaggtatatgtaaaactgtttaacttatggtgcagAGGGGGTCTTGTACGCCAAGAAGGACTACAACCTGGCCAAGCACCCCAAGCTTGATGTGCCCAACTTGGAGGTGATTAAGCTCATGCAGAGCTTCAAGTC

upper sequence: GLYMA05G37470.1 (Glycine max), 3'ss of exon 2
lower sequence: AT5G52650.1 (Arabidopsis thaliana), 3'ss of exon 2
--------------------------------------------------------------------------------------------gtaggtgccttagcatttatcacgaatcatcttcgttcgttagggttacgtctcg-ttgaacaatgaatcttacctt--tcgttg-gtgtt-tatggt----gcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGATCGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC
                                                                                            ||   |     |  | ||      ||  |  |  | | |  |   | | || | | ||  |   ||||  ||   ||  |  |    |||| |||| |    ||||| ||||||||||| ||||||||||| |||||| | || ||||| ||   |||||| || || || || || ||||||||||| |||||||||||||| ||
gttcgttcttcttaaatttgttcttagatctctgttttcttcagcttctgtgagtaaattgattcatttttaggcttatgccgatgaacattgtgatttttgaactagtttaggttaactagttatggtagcaattatgatgtttggcttagaaggtgaacattgtgttgattatcatatgttctatgatttttgcagAAGGAGTTTGCTTTGCGAAGAAGGATTTCAATCTTGCTAAGCATCCGTTGATCGATGTCCCCAACCTACAAGTGATTAAGCTTATGCAGAGTTTCAAATC

upper sequence: GLYMA05G37470.1 (Glycine max), 3'ss of exon 2
lower sequence: AT4G25740.2 (Arabidopsis thaliana), 3'ss of exon 2
--gtaggtgccttagcatttatcac---gaatcatcttcgttcgt-tagggttacgtctcgt-tgaacaatgaatc-ttacctttcgttggtgtttatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGATCGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC
   ||  ||     | |||||| |    | |   |  ||  | || ||| |  |    | || || | | | |||  | |  | |   ||| ||||     | ||||||||| ||||| || |||||||| |||||| |  | ||||| ||   ||| || || || || ||||| ||||||||||| |||||||||||||||||
atataactgttgagggatttattatctagtactgtactcagttgtctagagaaagaatttgtgtggatactaaatgatcatatcttactgg-gttt----cgtagAGGGAGTATGCTTTGCTAAGAAGGATTTCAATCTCCCAAAGCATCCGTTGATTGATGTACCAAACCTGCAAGTGATTAAGCTCATGCAGAGTTTCAAGTC

upper sequence: GLYMA05G37470.1 (Glycine max), 3'ss of exon 2
lower sequence: Vv02s0025g00310.t01 (Vitis vinifera), 3'ss of exon 2
-------gtaggtgccttagcatttatcacgaatcatcttcgttcgttagggttacgtctcg---ttgaacaatgaatcttacctttcgttggtgtttatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGATCGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC
            | |  |  | || | ||||| |     |  |||  |  | | | || |     ||     ||  || |||  | |  ||  | | | || | |||||||||||||||  ||||| ||||||| |||| | || || || || || ||||| || |||||||||||||| || ||| |||||||||| ||||||||
gtatcttacttattctctcactttaaccacgatttgctgtgattcagtgtgttcatgtttttattttattttattgattttatatattttttct-tgtttgcttcagAGGGAGTTTGCTATGCGAAAAAGGACTACAATCTCGCGAAACATCCCGATATCGATGTCCCGAATCTGCAGGTTATCAAGTTGATGCAGAGCTTCAAGTC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213601154|gb|DB956476.1|DB956476
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|207819722|gb|GD790426.1|GD790426
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATCTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|10847477|gb|BF070159.1|BF070159
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|208282863|gb|GE081129.1|GE081129
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|207733534|gb|GD711456.1|GD711456
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         G
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcag-
EST: gi|207733534|gb|GD711456.1|GD711456
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         G
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcag-
EST: gi|42722469|gb|CK768368.1|CK768368
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|33389315|gb|CA852522.1|CA852522
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTCCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|7234723|gb|AW570058.1|AW570058
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|26059702|gb|CA802616.1|CA802616
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|193545165|gb|FK499892.1|FK499892
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|209707969|gb|BW657051.1|BW657051
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGGAGATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|298199469|gb|HO042832.1|HO042832
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGTTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|17963656|gb|BM270402.1|BM270402
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|4292868|gb|AI441966.1|AI441966
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|151397420|gb|EV267293.1|EV267293
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|46492777|gb|CN472333.1|CN472333
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|193476945|gb|FK440422.1|FK440422
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|298189750|gb|HO038153.1|HO038153
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|4283967|gb|AI440722.1|AI440722
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|298183093|gb|HO028356.1|HO028356
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGGGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|298188583|gb|HO035276.1|HO035276
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|208062162|gb|GD858882.1|GD858882
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|31460202|gb|CD402170.1|CD402170
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCGATGTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|151397532|gb|EV267405.1|EV267405
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|298185778|gb|HO028089.1|HO028089
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGG
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|20498285|gb|BQ273215.1|BQ273215
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|8827626|gb|BE211356.1|BE211356
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|16349566|gb|BI975161.1|BI975161
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|208246851|gb|GE049391.1|GE049391
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTT-A-TTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|18734245|gb|BM528073.1|BM528073
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|15815258|gb|BI787533.1|BI787533
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|298191623|gb|HO039102.1|HO039102
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|10709798|gb|BF009522.1|BF009522
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|6666815|gb|AW278274.1|AW278274
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|298186733|gb|HO037366.1|HO037366
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|298189041|gb|HO035678.1|HO035678
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|9901971|gb|BE610939.1|BE610939
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|298176446|gb|HO026681.1|HO026681
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|6481915|gb|AW201186.1|AW201186
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|209705994|gb|BW664865.1|BW664865
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|298166296|gb|HO009267.1|HO009267
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|207785670|gb|GD755739.1|GD755739
EST:     ATCATCCCGGAGAAGAACCGTAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|298193728|gb|HO040376.1|HO040376
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|193383311|gb|FK347236.1|FK347236
EST:     AGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: AGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|208052467|gb|GD851316.1|GD851316
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|209711439|gb|BW665191.1|BW665191
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|31470942|gb|CD412970.1|CD412970
EST:     GATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: GATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|9564491|gb|BE474000.1|BE474000
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|9901586|gb|BE610554.1|BE610554
EST:     GATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: GATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|193430766|gb|FK392438.1|FK392438
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|193516121|gb|FK473803.1|FK473803
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|7041991|gb|AW471885.1|AW471885
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|254323236|gb|GR840041.1|GR840041
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|6747682|gb|AW318073.1|AW318073
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|208273123|gb|GE070073.1|GE070073
EST:     AGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: AGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|298176879|gb|HO026886.1|HO026886
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCATCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|298172684|gb|HO019724.1|HO019724
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|192305394|gb|FG997940.1|FG997940
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|298177270|gb|HO023517.1|HO023517
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAAAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|7590805|gb|AW706476.1|AW706476
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|298197445|gb|HO044924.1|HO044924
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCCTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|18038860|gb|BM307154.1|BM307154
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|298164221|gb|HO013866.1|HO013866
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTACAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|193542477|gb|FK499669.1|FK499669
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCGAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACC
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACC
EST: gi|23063898|gb|BU578672.1|BU578672
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|193526891|gb|FK487189.1|FK487189
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
EST: gi|6482968|gb|AW202234.1|AW202234
EST:     ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA
genomic: ATCATCCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... tatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gggttacgtctcgttgaacaatgaatcttacctttcgttggtgtttatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGATCGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC
                        atcttac  putative branch site (score: 3)
                   aatgaat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaggtgccttagcatttatcacgaatcatcttcgttcgttagggttacgtctcgttgaacaatgaatcttacctttcgttggtgtttatggtgcagAGGGAGTTTGCTTCGCGAAGAAGGACTTCAATTTGGCCAAGCACCCTGAGATCGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT