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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...taaatcatgtgaaatgcagagcattgtgttatgcttcaaagtggaaaaagcagtgctagttgagatagtttaattgggcacaattaattgtttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCAAGATGACGTGATCAGTTCCATGAAAGAAGCTGCATCCAAGGAACTGTTG

Basic information

species Glycine max
transcript GLYMA05G37150.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA05G37150.1 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os01g46980.1 (Oryza sativa), 3'ss of exon 2
taaatcatgtgaaatgcagagcattgtgttatgcttcaaagtggaaaaagcagtgctagttgagatagt--ttaattgggcacaattaattgtttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCAAGATGACGTGATCAGTTCCATGAAAGAAGCTGCATCCAAGGAACTGTTG
   ||    ||  |      |  |  |   || |  |    |    |   | | | |  |  |  |  |   | ||  |||    ||   |  ||  | |||||||||||| |||||||| ||||||||||| || ||||| ||||||||||| |||||  || | | |||||||||||| | |||  | ||| ||||  ||
-tgattgcttgttagcataggtttcatagaatccacctgtatcactatttctgggtttatccatttgttaactgatgaggccttgttttctcctttat-cagTGAGTACTCTATGCAGCTGAATGCTTCTCGCATCAAAGTGCTTCAAGCTCAGGATGATTTGGTTAATTCCATGAAAGAGGATGCTACAAAGCAACTCCTG

upper sequence: GLYMA05G37150.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G030167_T01 (Zea mays), 3'ss of exon 2
taaatcat-gtgaaatgcag-agcattgtgttatgcttcaaagtggaaaaagcagtgctagttgagatagtttaattgggca-caattaattgtttgttg-cagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCAAGATGACGTGATCAGTTCCATGAAAGAAGCTGCATCCAAGGAACTGTTG
     |||  ||   |||   ||| ||| |  |||       ||   ||      ||    || | |    |||  ||   |     |  ||| |||||  |||||||||||| |||||| | ||||||||||| || ||||||||||||||||| |||||  |  | |     |||||||| | |||    ||||||||  | 
----ccatcatggtttgctttagctttgagacatgtcattttgtatcaatgttcatgaattttcaaacctgttatctgacaagtttctgtttgcttgttaacagTGAGTACTCTATGCAGTTGAATGCTTCTCGCATCAAAGTTCTTCAAGCTCAGGATGATCTAGTTAACAAAATGAAAGACGATGCCATGAAGGAACTTCTC

upper sequence: GLYMA05G37150.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G070360_T01 (Zea mays), 3'ss of exon 2
---taaatcatgtgaaatgcagagcattgtgttatgcttcaaagtggaaaaagcagtgctagttgagatagtttaattgggcacaattaattgtttgttg-cagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCAAGATGACGTGATCAGTTCCATGAAAGAAGCTGCATCCAAGGAACTGTTG
   |   | || |   | ||| | |||| ||| ||| | ||     |   | |   |   |     | || | |||   ||  |  ||   || | |||  |||||||||||| |||||| | ||||||||||| || ||||||||||||||||| |||||  |  | |     |||||||| | |||    ||||||||  | 
atttgctttatcttcgaggcataccattatgtcatgttacatcaatgtttatgatttttcaaacctgtta-tctaacaaggttctgtt---tgctcgttaacagTGAGTACTCTATGCAGTTGAATGCTTCTCGCATCAAAGTTCTTCAAGCTCAGGATGATCTAGTAAACAAAATGAAAGACGATGCGATGAAGGAACTCCTC

upper sequence: GLYMA05G37150.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G078839_T01 (Zea mays), 3'ss of exon 2
----------taaatcatgtgaaatgcagagcattgtgttatgcttcaaagtggaaaaagcagtgctagttgagatagtttaattgggcacaattaattgtttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCAAGATGACGTGATCAGTTCCATGAAAGAAGCTGCATCCAAGGAACTGTTG
             |   |   | |||| ||  |   |  | |  |||    ||   ||| || |   | || |  |  | | |||| |           || |  |||||||| |||||||||||||| ||||||||  | |||||||| ||||||||||| |||||  || | |     |||   ||  | |||   || || ||  ||
tggatatttccccactttaccatatgctgatgaccatactgtttttcttt-tgtgtaaaaca-tatcaattcac-tgatcttattgtgtgtg-------gtcttatgcagTGATTACTCGATGCAGCTCAATGCTTCCAGAATTAAAGTCCTTCAAGCTCAGGATGATTTGGTAACAGATATGTTGGAGTCAGCAAGGAAAGAGCTACTG

upper sequence: GLYMA05G37150.1 (Glycine max), 3'ss of exon 2
lower sequence: AT4G11150.1 (Arabidopsis thaliana), 3'ss of exon 2
taaatcatgtgaaatgca-gagcattgtgttatgcttcaaagtggaaaaagcagtgctagt-tgagatagtttaattgggcacaatta----attgtttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCAAGATGACGTGATCAGTTCCATGAAAGAAGCTGCATCCAAGGAACTGTTG
 | ||  |  |   |    ||  ||| ||||   |||     |  |     | ||| ||   ||   || |||    |   | || |     |    || || |||||| ||||| |||||||||||||| ||  |||| |||||||||||||| ||||| ||  |  ||| | ||||||||||    ||| | ||||| ||  ||
-atattgttagttctctgtgaaaattatgttgatcttgttcattta-----ctgtgttatcgtgtattactttgccagaaaataactgtcatacatgttttttcagTGATTACTCTATGCAGCTAAATGCATCAAGGATCAAAGTTCTTCAAGCGCAAGACGATATTGTCAATGCCATGAAAGACCAAGCAGCTAAGGATCTTCTG

upper sequence: GLYMA05G37150.1 (Glycine max), 3'ss of exon 2
lower sequence: Vv02s0025g01000.t01 (Vitis vinifera), 3'ss of exon 2
taaatcatgtgaaatgcagagcattgtgttatgctt----caaagtggaaaaagcagtgctagttgagatagtttaattgggcacaattaattgtttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCAAGATGACGTGATCAGTTCCATGAAAGAAGCTGCATCCAAGGAACTGTTG
    |||   ||||     | || ||    |   ||    ||        ||   ||       ||| | |  | || ||     |  || |  ||||||||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||| |  | || ||||||||||| |||||||| ||||| ||  ||
actgtcagaagaaaaatgaatcaatgccacacctttttgtcattactagtaatataggatctactgaaaaa--tgaaatgaattta--tattgttttgttgcagTGAATACTCCATGCAGCTCAATGCCTCTCGGATTAAAGTTCTTCAAGCTCAAGATGACTTAGTTAGCTCCATGAAAGAGGCTGCATCGAAGGAGCTCCTG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|19054071|gb|BM732738.1|BM732738
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|298186732|gb|HO037365.1|HO037365
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|16346919|gb|BI972514.1|BI972514
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|58017216|gb|CX703958.1|CX703958
EST:     GGCAAGAATACGAACGCAAAGAGCGCCAAG-TGAAAATTCGCAAGAAGA-                         TGAAGTACTCGATGCAGCTAAATGCTTCTCGGA-TAAAGTTTCTTCAAGCT
genomic: GGCAAGAATACGAACGCAAAGAGCGCCAAGTTG-AAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTG-AGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAG-TTCTTCAAGCT
EST: gi|19052822|gb|BM731489.1|BM731489
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|9204105|gb|BE330329.1|BE330329
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|193452587|gb|FK418013.1|FK418013
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|31468134|gb|CD410162.1|CD410162
EST:     CGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: CGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|207761377|gb|GD730976.1|GD730976
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|9204646|gb|BE330870.1|BE330870
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|207795932|gb|GD764143.1|GD764143
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAG-TGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|31476013|gb|CD418041.1|CD418041
EST:     TTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: TTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|151409500|gb|EV279308.1|EV279308
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|19270286|gb|BM886542.1|BM886542
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|151401846|gb|EV271659.1|EV271659
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCACAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|58017411|gb|CX704153.1|CX704153
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|207701721|gb|GD681944.1|GD681944
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|8826403|gb|BE210133.1|BE210133
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|4313631|gb|AI460750.1|AI460750
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|7285006|gb|AW597493.1|AW597493
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|6913767|gb|AW395297.1|AW395297
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|5687988|gb|AI941003.1|AI941003
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|208254169|gb|GE051639.1|GE051639
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|8827226|gb|BE210956.1|BE210956
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|19937915|gb|BQ081474.1|BQ081474
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|151400393|gb|EV270207.1|EV270207
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|193570984|gb|FK528561.1|FK528561
EST:     GCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: GCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
EST: gi|192322756|gb|FK014447.1|FK014447
EST:     AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGAT                         TGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA
genomic: AGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATgtaacttcct ... tttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaaagcagtgctagttgagatagtttaattgggcacaattaattgtttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCAAGATGACGTGATCAGTTCCATGAAAGAAGCTGCATCCAAGGAACTGTTG
                                    aattaat  putative branch site (score: 3)
                                    aattaattgtttgtt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
taaatcatgtgaaatgcagagcattgtgttatgcttcaaagtggaaaaagcagtgctagttgagatagtttaattgggcacaattaattgtttgttgcagTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCAAGATGACGTGATCAGTTCCATGAAAGAAGCTGCATCCAAGGAACTGTTG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - tcatgtg
- - - - - - aatgcag
- - - - - - - - - - - - - - - -tgcttca
- - - - - - - - - - - - - - - - - - - - - -gaaaaag
- - - - - - - - - - - - - - - - - - - - - - - - - cagtgct