Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|193410191|gb|FK377102.1|FK377102EST: TTAAGCTGACACATACTGATGTGCCTGAAGAGGATAG GTATGGGAATGCTACTGTGGTGGAGAACACGGAAAGGGGGTGGCGGGATCT
genomic: TTAAGCTGACACATACTGATGTGCCTGAAGAGGATAGgtgagtgttt ... tgtattacagGTATGGGAATGCTACTGTGGTGGAGAACACGGAAAGGGGGTGGCGGGATCT
EST:
gi|193590496|gb|FK544974.1|FK544974EST: GGTGTTACGGTTGTTAAGCTGACACATACTGATGTGCCTGAAGAGGATAG GTATGGGAATGCTACTGTAGTGGAGAACACGGAAAGGGGGTGGCGGGATCT
genomic: GGTGTTACGGTTGTTAAGCTGACACATACTGATGTGCCTGAAGAGGATAGgtgagtgttt ... tgtattacagGTATGGGAATGCTACTGTGGTGGAGAACACGGAAAGGGGGTGGCGGGATCT
EST:
gi|192334778|gb|FK025269.1|FK025269EST: GGTGTTACGGTTGTTAAGCTGACACATACTGATGTGCCTGAAGAGGATAG GTATGGGAATGCTACTGTGGTGGAGAACACGGAAAGGGGGTGGCGGGATCT
genomic: GGTGTTACGGTTGTTAAGCTGACACATACTGATGTGCCTGAAGAGGATAGgtgagtgttt ... tgtattacagGTATGGGAATGCTACTGTGGTGGAGAACACGGAAAGGGGGTGGCGGGATCT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
gtgagtgtttgattgagaatttgggaatggtttggggaagttttgtttttgttttcttttgtttggtttgttaaggtggtgtgatttgttcttgaatctgtattacagGTATGGGAATGCTACTGTGGTGGAGAACACGGAAAGGGGGTGGCGGGATCTTATTTTCCAGAGGATACGTGCTGTTTTTGGTTTTGGAATTTGAGATTTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT