Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagtgaaactttcatcattcttggtccagttttgaagtgtattattttaaagactgatgtgaaacattttcatcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTCATACTCATCCTACGAAACCGGCTAAAGTATGCTCTGACTTACCGTGAAG

Basic information

species Glycine max
transcript GLYMA02G43080.2
intron # 2
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254338889|gb|GR847606.1|GR847606
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|21602405|gb|BQ612736.1|BQ612736
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|6567163|gb|AW234786.1|AW234786
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|193385523|gb|FK350759.1|FK350759
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCC
EST: gi|7147515|gb|AW509437.1|AW509437
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|6746785|gb|AW317241.1|AW317241
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|4292427|gb|AI441903.1|AI441903
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|6502344|gb|AW203717.1|AW203717
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|9439986|gb|BE440497.1|BE440497
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|7926117|gb|AW832143.1|AW832143
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|213600643|gb|DB968775.1|DB968775
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|298176444|gb|HO026679.1|HO026679
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|4397449|gb|AI496446.1|AI496446
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|8282832|gb|BE020393.1|BE020393
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|213601395|gb|DB968711.1|DB968711
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|12772358|gb|BG237285.1|BG237285
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|298180910|gb|HO022349.1|HO022349
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|298171801|gb|HO021393.1|HO021393
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|11687722|gb|BF595398.1|BF595398
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|10846499|gb|BF069362.1|BF069362
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|12773098|gb|BG238025.1|BG238025
EST:     GATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|6951685|gb|AW423753.1|AW423753
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|27426851|gb|CA938371.1|CA938371
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|20498572|gb|BQ273502.1|BQ273502
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|24136781|gb|BU927291.1|BU927291
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|209711614|gb|BW671325.1|BW671325
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|8827735|gb|BE211465.1|BE211465
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|6719056|gb|AW306703.1|AW306703
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         TCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|209722813|gb|BW682886.1|BW682886
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|13787407|gb|BG649999.1|BG649999
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|209712826|gb|BW684181.1|BW684181
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|298190664|gb|HO032785.1|HO032785
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|193563438|gb|FK521327.1|FK521327
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|13480539|gb|BG509882.1|BG509882
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|14258782|gb|BG881690.1|BG881690
EST:     GCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|19934743|gb|BQ079773.1|BQ079773
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|8283599|gb|BE021158.1|BE021158
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|8284693|gb|BE022235.1|BE022235
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCTCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|4397095|gb|AI496092.1|AI496092
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|213618083|gb|DB963716.1|DB963716
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|10847962|gb|BF071655.1|BF071655
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|192323079|gb|FK017020.1|FK017020
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|213612156|gb|DB956865.1|DB956865
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|16996882|gb|BM086254.1|BM086254
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|7692719|gb|AW760819.1|AW760819
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|209714483|gb|BW684859.1|BW684859
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|4396174|gb|AI495171.1|AI495171
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|208335308|gb|GE133337.1|GE133337
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCT
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCT
EST: gi|10844949|gb|BF068138.1|BF068138
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|37993906|gb|CF805652.1|CF805652
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|10847614|gb|BF070266.1|BF070266
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|37993916|gb|CF805662.1|CF805662
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|254338581|gb|GR845724.1|GR845724
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|9440022|gb|BE440533.1|BE440533
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|213611713|gb|DB960641.1|DB960641
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|298171044|gb|HO016076.1|HO016076
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACAC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACAC
EST: gi|7327050|gb|AW620848.1|AW620848
EST:     GTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
EST: gi|19934720|gb|BQ079750.1|BQ079750
EST:     GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT                         GCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC
genomic: GGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTgtaagtgaaa ... tcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

agttttgaagtgtattattttaaagactgatgtgaaacattttcatcctgtacagGCGCCCAAACCCTCATCTGGACCACACAAATCTAGGGAGTGCCTTCCCCTCATACTCATCCTACGAAACCGGCTAAAGTATGCTCTGACTTACCGTGAAG
                        gactgat  putative branch site (score: 3)
                                       ttttcatcct  putative PPT
       aagtgtattattttaa  TA-rich tract