Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|192311483|gb|FK005214.1|FK005214EST: GTTGCTGAAGAAGGAGGATGGAACTCTCTTTAATTCAACCATCTCATCCA GAAAGCAACTAATGGTAAAGGTTGCAGAGATGGTACCTAGGCATCATGGAA
genomic: GTTGCTGAAGAAGGAGGATGGAACTCTCTTTAATTCAACCATCTCATCCAgtaagattta ... tgttttgcagGAAAGCAACTAATGGTAAAGGTTGCAGAGATGGTACCTAGGCATCATGGAA
EST:
gi|192298676|gb|FG988572.1|FG988572EST: GTTGCTGAAGAAGGAGGATGGAACTCTCTTTAATTCAACCATCTCATCCA GAAAGCAACTAATGGTAAAGGTTGCAGAGATGGTACCTAGGCATCATGGAA
genomic: GTTGCTGAAGAAGGAGGATGGAACTCTCTTTAATTCAACCATCTCATCCAgtaagattta ... tgttttgcagGAAAGCAACTAATGGTAAAGGTTGCAGAGATGGTACCTAGGCATCATGGAA
EST:
gi|151400445|gb|EV270259.1|EV270259EST: GTTGCTGAAGAAGGAGGATGGAACTCTCTTTAATTCAACCATCTCATCCA GAAAGCAACTAATGGTAAAGGTTGCAGAGATGGTACCTAGGCATCATGGAA
genomic: GTTGCTGAAGAAGGAGGATGGAACTCTCTTTAATTCAACCATCTCATCCAgtaagattta ... tgttttgcagGAAAGCAACTAATGGTAAAGGTTGCAGAGATGGTACCTAGGCATCATGGAA
EST:
gi|16105750|gb|BI893490.1|BI893490EST: GTTGCTGAAGAAGGAGGATGGAACTCTCTTTAATTCAACCATCTCATCCA GAAAGCAACTAATGGTAAAGGTTGCAGAGATGGTACCTAGGCATCATGGAA
genomic: GTTGCTGAAGAAGGAGGATGGAACTCTCTTTAATTCAACCATCTCATCCAgtaagattta ... tgttttgcagGAAAGCAACTAATGGTAAAGGTTGCAGAGATGGTACCTAGGCATCATGGAA
EST:
gi|192311484|gb|FK005215.1|FK005215EST: GTTGCTGAAGAAGGAGGATGGAACTCTCTTTAATTCAACCATCTCATCCA GAAAGCAACTAATGGTAAAGGTTGCAGAGATGGTACCTAGGCATCATGGAA
genomic: GTTGCTGAAGAAGGAGGATGGAACTCTCTTTAATTCAACCATCTCATCCAgtaagattta ... tgttttgcagGAAAGCAACTAATGGTAAAGGTTGCAGAGATGGTACCTAGGCATCATGGAA
EST:
gi|192333864|gb|FK025125.1|FK025125EST: GTTGCTGAAGAAGGAGGATGGAACTCTCTTTAATTCAACCATCTCATCCA GAAAGCAACTAATGGTAAAGGTTGCAGAGATGATACCTAGGCATCATGGAA
genomic: GTTGCTGAAGAAGGAGGATGGAACTCTCTTTAATTCAACCATCTCATCCAgtaagattta ... tgttttgcagGAAAGCAACTAATGGTAAAGGTTGCAGAGATGGTACCTAGGCATCATGGAA
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.atacaaagaatctgaaatatctaatgctttcatttttgcggtgattgttttgcagGAAAGCAACTAATGGTAAAGGTTGCAGAGATGGTACCTAGGCATCATGGAAGGACCAAGAAGCAGGAGACTTCATCAACATCAACTGCTGGACCTTCCAC
atctaat putative branch site (score: 3)
ttgtttt putative PPT
aaatatctaat TA-rich tract