Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatttctcaacacctctatttttgttcccccctaattgaattgaatataatagataataggaacttgtttcagtgttgttgtcatgatttgtgatggtgtggtgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCGTGGTTGAATTGAATGGCAGGCTGAATAAGTGTGGGGTTATAAGCCCTCG

Basic information

species Glycine max
transcript GLYMA01G45060.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA01G45060.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G018228_T04 (Zea mays), 3'ss of exon 2
gtatttctcaacacctctatttttgttcccccctaattgaattgaatataatagataataggaacttgtttcagtgttgttgtcatgatttgtgatggtgtggtgctttgt-agGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCGTGGTTGAATTGAATGGCAGGCTGAATAAGTGTGGGGTTATAAGCCCTCG
                                 ||       | ||  | ||    | | | |  ||| |||| |  ||  |  | |        |  | | || || | | ||| |||||||| ||||||||||| || ||||||||||| |||||||| |||||||| ||  ||||||| || |||||||| ||||| ||||| ||||| ||
-------------------------------gttagccctcctcaaccttatgcccatttgaa--ttgcttcatt-ctgaggatacgcccctgattattattgttctatattagGTTACATTGGCGAGTTCGAGTACGTGGATGACCACAGAGCTGGGAAGATCGTGGTGGAGCTGAATGGAAGACTGAATAAATGTGGTGTTATTAGCCCACG

upper sequence: GLYMA01G45060.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G328578_T01 (Zea mays), 3'ss of exon 2
gtatttctcaacacctctatttttgttcccccctaattgaattgaatataatagataataggaacttgtttcagtgttgttgtcatgatttgtgatggtgtggtgctttgt-agGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCGTGGTTGAATTGAATGGCAGGCTGAATAAGTGTGGGGTTATAAGCCCTCG
                                 ||       | ||  | ||    | | | |  ||| |||| |  ||  |  | |        |  | | || || | | ||| |||||| | ||||||||||| || ||||||||||| |||||||| |||||||| ||  ||||||| || |||||||| ||||| ||||| ||||| ||
-------------------------------gttagccctcctcaaccttatgcccatttgaa--ttgcttcatt-ctgaggatacgtccctgattattattgttctatattagGCTACATTAGCGAGTTCGAGTACGTGGATGACCACAGAGCTGGGAAGATCGTGGTGGAGCTGAATGGAAGACTGAATAAATGTGGTGTTATTAGCCCACG

upper sequence: GLYMA01G45060.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G012117_T01 (Zea mays), 3'ss of exon 1
gtatttctcaacacctctatttttgttcccccctaattgaattgaatataatagataataggaacttgtttcagtgttgttgtcatgatttgtgatggtgtggtgctttgt-agGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCGTGGTTGAATTGAATGGCAGGCTGAATAAGTGTGGGGTTATAAGCCCTCG
                                 ||       | ||  | ||    | | | |  ||| |||| |  ||  |  | |        |  | | || || | | ||| |||||| | |||||||||||  ||||||||||||| | |||||| |||||| | ||  ||||||||||||||||||| ||||| ||||| ||||| ||
-------------------------------gttagccctcctcaaccttatgcccatttgaa--ttgcttcatt-ctgaggatacgtccctgattattattgttctatattagGCTACATTAGCGAGTTCGAGTACCTTGATGACCACAGAGGTGGGAAGATCGTGATGGAGCTGAATGGCAGGCTGAATAAATGTGGTGTTATTAGCCCACG

upper sequence: GLYMA01G45060.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G083497_T04 (Zea mays), 3'ss of exon 1
gtatttctcaacacctctatttttgttcccccctaattgaattgaatataatagataataggaacttgtttcagtgttgttgtcatgatttgtgatggtgtggtgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCGTGGTTGAATTGAATGGCAGGCTGAATAAGTGTGGGGTTATAAGCCCTCG
                        |||    |  |||    |     ||   |  |   || |     || |   | |     | ||||| ||| |  | |  |      |||| |||||||| ||||||||||| || ||||||||||| |||||||| || ||||| ||| |||| ||||| || || || || || || || ||||| ||
------------------------gttagttctcaatctcgtgccccatttcaattggcagca-----ttccgaggatacgtacctgattagtgcta-tattat------tagGATACATTGGCGAGTTCGAGTACGTGGATGACCACAGAGCTGGGAAGATTGTGGTGGAACTGAACGGCAGACTAAACAAATGCGGTGTAATTAGCCCCCG

upper sequence: GLYMA01G45060.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G177720_T01 (Zea mays), 3'ss of exon 1
gtatttctcaacacctctatttttgttcccccctaattgaattgaatataatagataataggaacttgtttcagtgttgttgtcatgatttgtgatggtgtggtgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCGTGGTTGAATTGAATGGCAGGCTGAATAAGTGTGGGGTTATAAGCCCTCG
                        |||  |    | | ||  | | |    |   | | | ||     || |   |   |   ||||||         |||| || | |||||| |||||||| ||||||||||| |||||||||||| |  | || || |||||||| ||| | || || |||||||| ||||| || || || ||||||||
------------------------gttagctagcactcgacctta-tgccctgtttca-atgactccattccgaggacatgtccatgatc------attgtgctgttatgtagGCTACATTGGAGAGTTCGAGTACGTTGATGACCACCGATCGGGCAAGATCGTGGTCGAACTCAACGGGAGGCTGAACAAGTGCGGCGTCATCAGCCCTCG

upper sequence: GLYMA01G45060.1 (Glycine max), 3'ss of exon 2
lower sequence: Vv13s0019g00530.t01 (Vitis vinifera), 3'ss of exon 3
------------------gtatttctcaacacctctatttttgttcccccctaattgaattgaatataatagataataggaacttgttt-cagtgttgttgtcatgatttg-tgatggtgtggtgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCGTGGTTGAATTGAATGGCAGGCTGAATAAGTGTGGGGTTATAAGCCCTCG
                  | |||||  |     || |||||  || |  |    || | ||    ||  |   |  | |  || ||| | || | || ||  | |  |||  ||||  | |  |||| |  ||| |||||||| ||||| |||||||||||||| |||||| |||| || || || |||||| ||||||| || || || || ||||||||||| || || ||
gtactaatcaattcatttgaatttcagattgtttcaattttcttttcttc----tttacttttgcattgtttttttttgttacctgtgtacatttttattcacgtattttactgattttattttgctctacagGTTACATTGGAGAGTTTGAGTATGTTGATGATCACAGGTCTGGAAAGATTGTTGTTGAACTGAATGGAAGACTAAACAAATGTGGGGTTATCAGTCCCCG

upper sequence: GLYMA01G45060.1 (Glycine max), 3'ss of exon 2
lower sequence: PP1S115_101V6.1 (Physcomitrella patens), 3'ss of exon 1
gtatttctcaacacctctatttttgttcccccctaattgaattgaatataatagataataggaacttgtttcagtgttgttgtcatgatttgtgatggtgtg---gtgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCGTGGTTGAATTGAATGGCAGGCTGAATAAGTGTGGGGTTATAAGCCCTCG
               |     |  |    |   |||   | |    | |  | |||     |  |||   | ||  |     | | | | | | |   | |     | | ||  ||| |||||||| ||||| ||   ||| |||||||||||||| |||||||| ||||| ||  |||| |||||| |||| |||||||| || || || || ||
---------------taatagtaagggaacatgtaacgtagtcatgt-tggtggatcgagcgtcctttcatgagcttgaacctgacgttcttttaaaatatacatattcatttcagGCTACATTGGAGAGTTTGAACTTGTGGATGACCACAGGGCAGGGAAAATTGTGGTGGAGCTGAACGGCAGGTTGAACAAGTGTGGTGTGATCAGTCCCCG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|12773918|gb|BG238845.1|BG238845
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|4306745|gb|AI443948.1|AI443948
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193399833|gb|FK369980.1|FK369980
EST:     CCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGAATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAG
genomic: CCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGA-TGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAG
EST: gi|208041093|gb|GD842592.1|GD842592
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193686376|gb|FK626385.1|FK626385
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTTAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|7233861|gb|AW569204.1|AW569204
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|208261415|gb|GE060857.1|GE060857
EST:     CTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: CTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|208066195|gb|GD863992.1|GD863992
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|192330019|gb|FK020835.1|FK020835
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|208258477|gb|GE056338.1|GE056338
EST:     AGGTCATAATAAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCA
genomic: AGGTCATAAT-AAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCA
EST: gi|6846271|gb|AW348561.1|AW348561
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193399891|gb|FK370038.1|FK370038
EST:     CCGTCCT-GAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: CCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|213591764|gb|DB973371.1|DB973371
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|192334186|gb|FK026567.1|FK026567
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193530692|gb|FK484945.1|FK484945
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|209726482|gb|BW662834.1|BW662834
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|208095806|gb|GD894566.1|GD894566
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|192298113|gb|FG991393.1|FG991393
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193599823|gb|FK551590.1|FK551590
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193543311|gb|FK500614.1|FK500614
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|208030648|gb|GD831150.1|GD831150
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATC
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATC
EST: gi|209726497|gb|BW662835.1|BW662835
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|31469585|gb|CD411613.1|CD411613
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|213597346|gb|DB977765.1|DB977765
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|7686423|gb|AW757071.1|AW757071
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|192334185|gb|FK026566.1|FK026566
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193549445|gb|FK508820.1|FK508820
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|208319409|gb|GE115936.1|GE115936
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193522083|gb|FK478162.1|FK478162
EST:     CGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAAGACATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATC
genomic: CGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAG-AAG-CATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATC
EST: gi|208147281|gb|GD944948.1|GD944948
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193398449|gb|FK362089.1|FK362089
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|208333300|gb|GE132785.1|GE132785
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193431083|gb|FK396801.1|FK396801
EST:     CCGTCCTCGAAGGTCATAATAAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: CCGTCCTCGAAGGTCATAAT-AAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|213587877|gb|DB959701.1|DB959701
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193313411|gb|FK278694.1|FK278694
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193528780|gb|FK483568.1|FK483568
EST:     AGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: AGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|207778504|gb|GD749333.1|GD749333
EST:     CCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: CCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|4292212|gb|AI437730.1|AI437730
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|151408384|gb|EV278192.1|EV278192
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193594084|gb|FK548118.1|FK548118
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|207683946|gb|GD667433.1|GD667433
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193420897|gb|FK387502.1|FK387502
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|208116878|gb|GD918604.1|GD918604
EST:     GATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193413131|gb|FK380866.1|FK380866
EST:     GTCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193341343|gb|FK308361.1|FK308361
EST:     GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCGTCCTCGAAGGTCATAATAAAATTCCTCTTGGTGATGCAGAAGCATGgtatttctca ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

taggaacttgtttcagtgttgttgtcatgatttgtgatggtgtggtgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCGTGGTTGAATTGAATGGCAGGCTGAATAAGTGTGGGGTTATAAGCCCTCG
                          atgattt  TA-rich tract