1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
gtaaatttcttgatatcattaattgatttaaatagtatgtttatggcactagctcagtgtattgacctggtttacttggaatttgcagCTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTTCTAAAATTCATCCATAAGGTACAGTTGATAAGCCGCCTGTTATATGTACCGCATT
species | Glycine max |
transcript | GLYMA13G18470.1 |
intron # | 18 |
splice site | 3' |
intron type | U2 |
EST: TATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGG CTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTTCTAAAAEST: gi|193545264|gb|FK499487.1|FK499487
genomic: TATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGGgtaaatttct ... gaatttgcagCTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTTCTAAAA
EST: TATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGG CTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTTEST: gi|10231191|gb|BE800007.1|BE800007
genomic: TATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGGgtaaatttct ... gaatttgcagCTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTT
EST: TATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGG CTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTTCTAAAAEST: gi|6726074|gb|AW310473.1|AW310473
genomic: TATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGGgtaaatttct ... gaatttgcagCTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTTCTAAAA
EST: TATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGG CTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTTCTAAAAEST: gi|10237487|gb|BE806375.1|BE806375
genomic: TATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGGgtaaatttct ... gaatttgcagCTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTTCTAAAA
EST: ATGACAAAGCCGAAGCATTTAGTTGGG-TTTACAGAGACTCTGAAAGAGG CTGT-CGAGAACTCTCAEST: gi|6502274|gb|AW203647.1|AW203647
genomic: ATGACAAAGCCGAAGCATT-AGTTGGGGTTTACAGAGACTCTGAAAGAGGgtaaatttct ... gaatttgcagCTGTTCGAGAACTCTCA
EST: TATGACAAAGCCGAAGCATTAGTTGGGGTNTACAGAGACTCTGAAAGAAG CTGGTCGAGAACTCTCACATTTGEST: gi|16343490|gb|BI969085.1|BI969085
genomic: TATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGGgtaaatttct ... gaatttgcagCTGTTCGAGAACTCTCACATTTG
EST: TATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGG CTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTTCTAAAAEST: gi|31471677|gb|CD413705.1|CD413705
genomic: TATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGGgtaaatttct ... gaatttgcagCTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTTCTAAAA
EST: TATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGG CTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTTCTAAAAEST: gi|13562462|gb|BG550682.1|BG550682
genomic: TATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGGgtaaatttct ... gaatttgcagCTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTTCTAAAA
EST: TATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGG CTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTTCTAAAAEST: gi|31311145|gb|CD396348.1|CD396348
genomic: TATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGGgtaaatttct ... gaatttgcagCTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTTCTAAAA
EST: TATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGG CTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTTCTAAAAEST: gi|13252606|gb|BG363509.1|BG363509
genomic: TATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGGgtaaatttct ... gaatttgcagCTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTTCTAAAA
EST: TATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGG CTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTTCTAAAA
genomic: TATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGGgtaaatttct ... gaatttgcagCTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTTCTAAAA
agtatgtttatggcactagctcagtgtattgacctggtttacttggaatttgcagCTGTTCGAGAACTCTCACATTTGATTTGACTAAATACCGAGAGTTCTAAAATTCATCCATAAGGTACAGTTGATAAGCCGCCTGTTATATGTACCGCATT
tattgac putative branch site (score: 2)
tttactt TA-rich tract