1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' |
gtaagtgatgtgcattaattctcattaacatgtttttttgtgcaaggaattgagaatttattcgttgcttgaatgatttcagttcacagatgtttattttaatattactgtttcattcagGGATCACGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAATCGCAGCCTCTTATGGACCAACTATGGATTACGTTCTCTTGCCAAAACAAG
species | Glycine max |
transcript | GLYMA05G27900.2 |
intron # | 18 |
splice site | 3' |
intron type | U2 |
EST: ACATTGGTTATGTTAGTTTATTCCCGTTCATGGGAAGGATCATTCCATCT GGATCACGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAATCGCAGCCTCEST: gi|208165043|gb|GD964991.1|GD964991
genomic: ACATTGGTTATGTTAGTTTATTCCCGTTCATGGGAAGGATCATTCCATCTgtaagtgatg ... tttcattcagGGATCACGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAATCGCAGCCTC
EST: ACATTGGTTATGTTAGTTTATACCCGTTCATGGGAAGGATCATTCCATCT GGATCACGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAATCGCAGCCTCEST: gi|58018465|gb|CX705207.1|CX705207
genomic: ACATTGGTTATGTTAGTTTATTCCCGTTCATGGGAAGGATCATTCCATCTgtaagtgatg ... tttcattcagGGATCACGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAATCGCAGCCTC
EST: GGAAGGATCATTCCATCT GGATCACGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAATCGCAGCCTCEST: gi|193389910|gb|FK353675.1|FK353675
genomic: GGAAGGATCATTCCATCTgtaagtgatg ... tttcattcagGGATCACGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAATCGCAGCCTC
EST: ACATTGGTTATGTTAGTTTATTCCCGTTCATGGGAAGGATCATTCCATCT GGATCACGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAATCGC
genomic: ACATTGGTTATGTTAGTTTATTCCCGTTCATGGGAAGGATCATTCCATCTgtaagtgatg ... tttcattcagGGATCACGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAATCGC
tgcttgaatgatttcagttcacagatgtttattttaatattactgtttcattcagGGATCACGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAATCGCAGCCTCTTATGGACCAACTATGGATTACGTTCTCTTGCCAAAACAAG
ttttaat putative branch site (score: 3)
tttcattc putative PPT
atgtttattttaatat TA-rich tract