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tagaataagattgtgaagtttcaactaccgttagaatccttgaaataatcgctacaggtttacaatgtccccaccaaccaacttgagcttattcttcttgcagaTTGCAATATCCAATCCAAGTCCAGAAGTTCTGCTTACCTTGTCTAGATCGGGTCTGGTGGAGTTGATAGGCAAAGAATGGTACTTTGTGAGAGTACATGA
species | Glycine max |
transcript | GLYMA18G52270.1 |
intron # | 16 |
splice site | 3' |
intron type | U2 |
EST: TCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACATTCAGA TTGCAATATCCAATCCAAGTCCAGAAGTTCTGCTTACCTTGTCTAGATCGGEST: gi|254344974|gb|GR855631.1|GR855631
genomic: TCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACATTCAGGtagaataaga ... ttcttgcagaTTGCAATATCCAATCCAAGTCCAGAAGTTCTGCTTACCTTGTCTAGATCGG
EST: TCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACATTCAGA TTGCAATATCCAATCCAAGTCCAGAAGTTCTGCTTACCTTGTCTAGATCGGEST: gi|10231708|gb|BE800596.1|BE800596
genomic: TCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACATTCAGGtagaataaga ... ttcttgcagaTTGCAATATCCAATCCAAGTCCAGAAGTTCTGCTTACCTTGTCTAGATCGG
EST: TCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACATTCAGA TTGCAATATCCAATCCAAGTCCAGAAGTTCTGCTTACCTTGTCTAGATCGGEST: gi|10233753|gb|BE802641.1|BE802641
genomic: TCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACATTCAGGtagaataaga ... ttcttgcagaTTGCAATATCCAATCCAAGTCCAGAAGTTCTGCTTACCTTGTCTAGATCGG
EST: TCACGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACATTCAGA TTGCAATATCCAATCCAAGTCCAGAAGTTCTGCTTACCTTGTCTAGATCGGEST: gi|192300273|gb|FG988780.1|FG988780
genomic: TCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACATTCAGGtagaataaga ... ttcttgcagaTTGCAATATCCAATCCAAGTCCAGAAGTTCTGCTTACCTTGTCTAGATCGG
EST: TCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACATTCAGA TTGCAATATCCAATCCAAGTCCAGAAGTTCTGCTTACCTTGTCTAGATCGG
genomic: TCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACATTCAGGtagaataaga ... ttcttgcagaTTGCAATATCCAATCCAAGTCCAGAAGTTCTGCTTACCTTGTCTAGATCGG
cgctacaggtttacaatgtccccaccaaccaacttgagcttattcttcttgcagaTTGCAATATCCAATCCAAGTCCAGAAGTTCTGCTTACCTTGTCTAGATCGGGTCTGGTGGAGTTGATAGGCAAAGAATGGTACTTTGTGAGAGTACATGA
cttattcttcttgc CT-rich tract
tttacaat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tagaataagattgtgaagtttcaactaccgttagaatccttgaaataatcgctacaggtttacaatgtccccaccaaccaacttgagcttattcttcttgcagaTTGCAATATCCAATCCAAGTCCAGAAGTTCTGCTTACCTTGTCTAGATCGGGTCTGGTGGAGTTGATAGGCAAAGAATGGTACTTTGTGAGAGTACATGA
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