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...tttcctttatttttctgtttggaaaatatagcaagatgaataagtatgtctagtaacaaatagtaatagttctgactattcaaatcctttttatctgaagGGGGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGATTTACTTTTTATGAACCCACGGTCATCAGTGATGTCAACAGTGATATGCGCATATCAA
species | Glycine max |
transcript | GLYMA15G41690.1 |
intron # | 15 |
splice site | 3' |
intron type | U2 |
EST: GTTGAGTCCTTAATTCATGATGCTACATCAAAG GGGGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGATTTACTTTTEST: gi|151400125|gb|EV269939.1|EV269939
genomic: GTTGAGTCCTTAATTCATGATGCTACATCAAAGgtttgttgct ... ttatctgaagGGGGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGATTTACTTTT
EST: GTTGAGTCCTTAATTCATGATGCTACATCAAAG GGGGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGATTTACTTTTEST: gi|7146475|gb|AW508397.1|AW508397
genomic: GTTGAGTCCTTAATTCATGATGCTACATCAAAGgtttgttgct ... ttatctgaagGGGGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGATTTACTTTT
EST: ATGCTACATCAAAG GGGGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGATTTACTTTTEST: gi|151404401|gb|EV274211.1|EV274211
genomic: ATGCTACATCAAAGgtttgttgct ... ttatctgaagGGGGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGATTTACTTTT
EST: GTTGAGTCCTTAATTCATGATGCTACATCAAAG GGGGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGATTTACTTTTEST: gi|298198520|gb|HO040059.1|HO040059
genomic: GTTGAGTCCTTAATTCATGATGCTACATCAAAGgtttgttgct ... ttatctgaagGGGGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGATTTACTTTT
EST: GTTGAGTCCTTAATTCATGATGCTACATCAAAG GGGGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGATTTACTTTT
genomic: GTTGAGTCCTTAATTCATGATGCTACATCAAAGgtttgttgct ... ttatctgaagGGGGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGATTTACTTTT
atgtctagtaacaaatagtaatagttctgactattcaaatcctttttatctgaagGGGGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGATTTACTTTTTATGAACCCACGGTCATCAGTGATGTCAACAGTGATATGCGCATATCAA
tcctttttatct CT-rich tract
taacaaatagtaata TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tttcctttatttttctgtttggaaaatatagcaagatgaataagtatgtctagtaacaaatagtaatagttctgactattcaaatcctttttatctgaagGGGGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGATTTACTTTTTATGAACCCACGGTCATCAGTGATGTCAACAGTGATATGCGCATATCAA
- - - - - - - ctgtttg
- - - - - - - - - - - - - - - - - - - - - - - - - - gtaacaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttctgac