1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
...gaaacagataaaatgttgaaagaaaatacttatgaatctgaatatgatttgttttaaccctaatgtgcaatcaattgttaatttgataatgtacttgcagTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAGTCAAAGAGCTTGCTCTTTCACTGATAGTTGAAATGCTTAAAA
species | Glycine max |
transcript | GLYMA03G32710.1 |
intron # | 15 |
splice site | 3' |
intron type | U2 |
EST: AACAATTGGTTGAAGCTTCTATAACAAATGATCATTCTGTTTGGACCAAG TACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATEST: gi|26058393|gb|CA801307.1|CA801307
genomic: AACAATTGGTTGAAGCTTCTATAACAAATGATCATTCTGTTTGGACCAAGgtatgcttga ... gtacttgcagTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGAT
EST: AACAATTGGTTGAAGCTTCTATAACAAATGATCATTCTGTTTGGACCAAG TACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATEST: gi|22522450|gb|BU081261.1|BU081261
genomic: AACAATTGGTTGAAGCTTCTATAACAAATGATCATTCTGTTTGGACCAAGgtatgcttga ... gtacttgcagTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGAT
EST: AACAATTGGTTGAAGCTTCTATAACAAATGATCATTCTGTTTGGACCAAG TACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATEST: gi|22523884|gb|BU082695.1|BU082695
genomic: AACAATTGGTTGAAGCTTCTATAACAAATGATCATTCTGTTTGGACCAAGgtatgcttga ... gtacttgcagTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGAT
EST: AACAATTGGTTGAAGCTTCTATAACAAATGATCATTCTGTTTGGACCAAG TACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATEST: gi|58021485|gb|CX708226.1|CX708226
genomic: AACAATTGGTTGAAGCTTCTATAACAAATGATCATTCTGTTTGGACCAAGgtatgcttga ... gtacttgcagTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGAT
EST: AACAATTGGTTGAAGCTTCTATAACAAATGATCATTCTGTTTGGACCAAG TACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGAT
genomic: AACAATTGGTTGAAGCTTCTATAACAAATGATCATTCTGTTTGGACCAAGgtatgcttga ... gtacttgcagTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGAT
gatttgttttaaccctaatgtgcaatcaattgttaatttgataatgtacttgcagTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAGTCAAAGAGCTTGCTCTTTCACTGATAGTTGAAATGCTTAAAA
aatcaattgttaattt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gaaacagataaaatgttgaaagaaaatacttatgaatctgaatatgatttgttttaaccctaatgtgcaatcaattgttaatttgataatgtacttgcagTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAGTCAAAGAGCTTGCTCTTTCACTGATAGTTGAAATGCTTAAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
gaaacaga
- - - - - - - - - -aagaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgcaatc