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gtaagcttttcagtctctgatattcttaattattgtttcaagaattcttttatagatgatcaccaaaatcgatttgtattaattatttattttagtattatatctttgagagaagtggtttcttcttttccctaatgaactaaaaaagattttgtgtggatcttattgtttatggaaacttatatgttggttgttggcagCTTCTATGAACAAAGGGAGGTCTGTACGTGGGGTTTCAGAAACAGCTGAAAAGTTGGGCAATTTGTCTGTTTCCAGTCGAAGACAATCAATGGGGCAACC
species | Glycine max |
transcript | GLYMA01G35190.1 |
intron # | 15 |
splice site | 3' |
intron type | U2 |
EST: AATGAGGACTACTAAACCAAAATATCGTCAGCCAGGAAAGGACAGCCCAA CTTCTATGAACAAAGGGAGGTCTGTACGTGGGGTTTCAGAAACAGCTGAAAEST: gi|19348400|gb|BM892932.1|BM892932
genomic: AATGAGGACTACTAAACCAAAATATCGTCAGCCAGGAAAGGACAGCCCAAgtaagctttt ... ttgttggcagCTTCTATGAACAAAGGGAGGTCTGTACGTGGGGTTTCAGAAACAGCTGAAA
EST: AATGAGGACTACTAAACCAAAATATCGTCAGCCAGGAAAGGACAGCCCAA CTTCTATGAACAAAGGGAGGTCTGTACGTGGGGTTTCAGAAACAGCTGAAAEST: gi|6454955|gb|AW185565.1|AW185565
genomic: AATGAGGACTACTAAACCAAAATATCGTCAGCCAGGAAAGGACAGCCCAAgtaagctttt ... ttgttggcagCTTCTATGAACAAAGGGAGGTCTGTACGTGGGGTTTCAGAAACAGCTGAAA
EST: ATGGGGACTTCCTAAACCAAA-TATTGTCAGCCAGGAAAGGACAGCCCAA CTTCTATGAACAAAGGGAGGTCTGTACGTGGGGTTTCAGAAACAGCTGAAAEST: gi|298178671|gb|HO024406.1|HO024406
genomic: ATGAGGACTAC-TAAACCAAAATATCGTCAGCCAGGAAAGGACAGCCCAAgtaagctttt ... ttgttggcagCTTCTATGAACAAAGGGAGGTCTGTACGTGGGGTTTCAGAAACAGCTGAAA
EST: AATGAGGACTACTAAACCAAAATATCGTCAGCCAGGAAAGGACAGCCCAA CTTCTATGAACAAAGGGAGGTCTGTACGTGG
genomic: AATGAGGACTACTAAACCAAAATATCGTCAGCCAGGAAAGGACAGCCCAAgtaagctttt ... ttgttggcagCTTCTATGAACAAAGGGAGGTCTGTACGTGG
aagattttgtgtggatcttattgtttatggaaacttatatgttggttgttggcagCTTCTATGAACAAAGGGAGGTCTGTACGTGGGGTTTCAGAAACAGCTGAAAAGTTGGGCAATTTGTCTGTTTCCAGTCGAAGACAATCAATGGGGCAACC
atcttattgtttat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaagcttttcagtctctgatattcttaattattgtttcaagaattcttttatagatgatcaccaaaatcgatttgtattaattatttattttagtattatatctttgagagaagtggtttcttcttttccctaatgaactaaaaaagattttgtgtggatcttattgtttatggaaacttatatgttggttgttggcagCTTCTATGAACAAAGGGAGGTCTGTACGTGGGGTTTCAGAAACAGCTGAAAAGTTGGGCAATTTGTCTGTTTCCAGTCGAAGACAATCAATGGGGCAACC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA