Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   		13  
 5'  3'   		14  
 5'  3'   		15  
 5'  3'   		16  
 5'  3'   		17  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttgtaaactttgtttagcatttgggcattgtcattgaatgaaatatagtcaaagtattgaattcttgtcctttcttatcttgagtagAAAACAATGGACCGGTTTATCCATCTGTAACTGCATTTGAGAGCAGCTCCTTGAGGTTGACATTCAATTTCTCAAAACAACCAGGAAACCCACAAACAAC

Basic information

species Glycine max
transcript GLYMA01G03890.1
intron # 15
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22523555|gb|BU082357.1|BU082357
EST:     TGCTCCTATGATGGATTTATTGGATGGATTTGCCCCCATCCCGCCAACAG                         AAAACAATGGACCGGTTTATCCATCTGTAACTGCATTTGAGAGCAGCTCCT
genomic: TGCTCCTATGATGGATTTATTGGATGGATTTGCCCCCATCCCGCCAACAGgttgtaaact ... tcttgagtagAAAACAATGGACCGGTTTATCCATCTGTAACTGCATTTGAGAGCAGCTCCT






















 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

attgaatgaaatatagtcaaagtattgaattcttgtcctttcttatcttgagtagAAAACAATGGACCGGTTTATCCATCTGTAACTGCATTTGAGAGCAGCTCCTTGAGGTTGACATTCAATTTCTCAAAACAACCAGGAAACCCACAAACAAC
                             ttcttgtcctttctta  CT-rich tract
     atgaaatata  TA-rich tract