1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtacattctagattattagaacattttctgaggcatctctttcctcaactcaaatggggtttatctgttaacacaatctgctttacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTGAAAGCGGCTTCCTGCTTGATGATCCCAAGGATTTTGCTTCCCGGATTT
species | Glycine max |
transcript | GLYMA14G40320.2 |
intron # | 14 |
splice site | 3' |
intron type | U2 |
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|254328196|gb|GR835161.1|GR835161
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|213592973|gb|DB983373.1|DB983373
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: CAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|42722966|gb|CK768865.1|CK768865
genomic: CAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|192307635|gb|FG999674.1|FG999674
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|151398470|gb|EV268341.1|EV268341
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|7234397|gb|AW569735.1|AW569735
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|7795115|gb|AW780512.1|AW780512
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGATGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|7233245|gb|AW568593.1|AW568593
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|192307636|gb|FG999675.1|FG999675
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|6201082|gb|AW153182.1|AW153182
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTTAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|33390550|gb|CA853745.1|CA853745
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|4306807|gb|AI443957.1|AI443957
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|7795342|gb|AW780801.1|AW780801
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAN GATGANGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|298164866|gb|HO010863.1|HO010863
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|5760776|gb|AI966139.1|AI966139
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGTTAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|298185056|gb|HO030269.1|HO030269
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|16282387|gb|BI944989.1|BI944989
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|4299465|gb|AI442908.1|AI442908
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|13788894|gb|BG651485.1|BG651485
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|254343167|gb|GR859329.1|GR859329
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|37995336|gb|CF806925.1|CF806925
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCAEST: gi|42723040|gb|CK768939.1|CK768939
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCA
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|23726943|gb|BU761483.1|BU761483
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|13788861|gb|BG651452.1|BG651452
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|192301694|gb|FG997622.1|FG997622
genomic: GTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTGGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|21602387|gb|BQ612718.1|BQ612718
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTEST: gi|209716278|gb|BW657581.1|BW657581
genomic: GGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
EST: CAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAG GATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
genomic: CAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGgtacattcta ... tacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTT
ctttcctcaactcaaatggggtttatctgttaacacaatctgctttacttttcagGATGAGGGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTTGAAAGCGGCTTCCTGCTTGATGATCCCAAGGATTTTGCTTCCCGGATTT
tgttaac putative branch site (score: 2)
tctgctttacttttc putative PPT
tttactttt TA-rich tract