1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtgagttgaatttggaacacaacaatggctttgtctctagtgtcagatgaacaatacatgatcattcacaggtaaccctctttggacagATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAATCGTGGCCCTTCGAAAATCTCAATTACAGCCAACTGGGATGACATTGATA
species | Glycine max |
transcript | GLYMA18G44820.1 |
intron # | 13 |
splice site | 3' |
intron type | U2 |
EST: ATCCACTTGGTGTACAAGGTAAAA-GGTTAGGATGGAAGGTGATCAAGAG ATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAATEST: gi|51335838|gb|CO979704.1|CO979704
genomic: ATCCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAGgtgagttgaa ... ctttggacagATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAAT
EST: ATCCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAG ATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAATEST: gi|207751779|gb|GD723996.1|GD723996
genomic: ATCCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAGgtgagttgaa ... ctttggacagATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAAT
EST: ATCCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAG ATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGEST: gi|193378399|gb|FK345090.1|FK345090
genomic: ATCCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAGgtgagttgaa ... ctttggacagATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAG
EST: GTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAG ATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAATEST: gi|192330118|gb|FK019773.1|FK019773
genomic: GTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAGgtgagttgaa ... ctttggacagATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAAT
EST: ATCCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAG ATTTGGGCAGGTCCTCTTTCAGGGTACAGGGGTAGCTGTTGTCTTGCTTAAEST: gi|208198385|gb|GD995476.1|GD995476
genomic: ATCCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAGgtgagttgaa ... ctttggacagATTTGGGCAGGTCCTCTTTCAGGGTACAGGG-TAGCTGTTGTCTTGCTTAA
EST: ATCCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAG AATTTAGGGCAGGTCCTCTTTCEST: gi|193652033|gb|FK594209.1|FK594209
genomic: ATCCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAGgtgagttgaa ... ctttggacagA-TTT-GGGCAGGTCCTCTTTC
EST: AGGATGGAAGGTGATCAAGAG ATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAATEST: gi|31309897|gb|CD395100.1|CD395100
genomic: AGGATGGAAGGTGATCAAGAGgtgagttgaa ... ctttggacagATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAAT
EST: ATCCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAG ATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAATEST: gi|13312579|gb|BG406230.1|BG406230
genomic: ATCCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAGgtgagttgaa ... ctttggacagATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAAT
EST: ATCCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAG ATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAATEST: gi|208179640|gb|GD973615.1|GD973615
genomic: ATCCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAGgtgagttgaa ... ctttggacagATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAAT
EST: TAAAAAGGTTAGGATGGAAGGTGATCAAGAG ATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAATEST: gi|193535806|gb|FK492224.1|FK492224
genomic: TAAAAAGGTTAGGATGGAAGGTGATCAAGAGgtgagttgaa ... ctttggacagATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAAT
EST: GTTAGGATGGAAGGTGTATCAAGAG ATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAAEST: gi|193301284|gb|FK266401.1|FK266401
genomic: GTTAGGATGGAAGGTG-ATCAAGAGgtgagttgaa ... ctttggacagATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAA
EST: ATCCACTTGGTGTACAAGGT-AAAAGGTTAGGATGGAAGGTGATCAAGAG ATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTEST: gi|193495866|gb|FK458558.1|FK458558
genomic: ATCCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAGgtgagttgaa ... ctttggacagATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTT
EST: ATCCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAG ATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAATEST: gi|151401278|gb|EV271092.1|EV271092
genomic: ATCCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAGgtgagttgaa ... ctttggacagATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAAT
EST: GGTGATCAAGAG ATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAATEST: gi|193490814|gb|FK455939.1|FK455939
genomic: GGTGATCAAGAGgtgagttgaa ... ctttggacagATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAAT
EST: TTCCACTTGGTGTACAAGGT-AAAAGGTTAGGATGGAAGGTGATCAAGAG ATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCT
genomic: -TCCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAGgtgagttgaa ... ctttggacagATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCT
ctctagtgtcagatgaacaatacatgatcattcacaggtaaccctctttggacagATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAATCGTGGCCCTTCGAAAATCTCAATTACAGCCAACTGGGATGACATTGATA
aggtaac putative branch site (score: 3)
ccctcttt CT-rich tract
aacaata TA-rich tract