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...tttcatcttcgtataagttgactcgatttgattgatatgtactgatgcttataccatttctatacctttctaatcataacctttggttttgattatatagCTTGGTTTAGGATTTGGAATTGCCGAACCTATGCTGTCTGGTAACAGTGACTTCTCGAAGTTATTCTATGACTGCAAGGAGTACATAATTACTGCTTGTC
species | Glycine max |
transcript | GLYMA14G02550.1 |
intron # | 12 |
splice site | 3' |
intron type | U2 |
EST: TTGAAGAAATGCATCCATCTGATCTTTTTGGACAGCTGTTTGTTTCTTTA CTTGGTTTAGGATTTGGAATTGCCGAACCTATGCTGTCTGGTAACAGTGACEST: gi|58022233|gb|CX708974.1|CX708974
genomic: TTGAAGAAATGCATCCATCTGATCTTTTTGGACAGCTGTTTGTTTCTTTAgtaagttctt ... gattatatagCTTGGTTTAGGATTTGGAATTGCCGAACCTATGCTGTCTGGTAACAGTGAC
EST: TTGAAGAAATGCATCCATCTGATCTTTTTGGACAGCTGTTTGTTTCTTTA CTTGGTTTAGGATTTGGAATTGCCGAACCTATGCTGTCTGGTAACAGTGACEST: gi|21676431|gb|BQ628782.1|BQ628782
genomic: TTGAAGAAATGCATCCATCTGATCTTTTTGGACAGCTGTTTGTTTCTTTAgtaagttctt ... gattatatagCTTGGTTTAGGATTTGGAATTGCCGAACCTATGCTGTCTGGTAACAGTGAC
EST: TTGAAGAAATGCATCCATCTGATCTTTTTGGACAGCTGTTTGTTTCTTTA CTTGGTTTAGGATTTGGAATTGCCGAACCTATGCTGTCTGGTAACAGTGACEST: gi|21256661|gb|BQ453549.1|BQ453549
genomic: TTGAAGAAATGCATCCATCTGATCTTTTTGGACAGCTGTTTGTTTCTTTAgtaagttctt ... gattatatagCTTGGTTTAGGATTTGGAATTGCCGAACCTATGCTGTCTGGTAACAGTGAC
EST: TTGAAGAAATGCATCCATCTGATCTTTTTGGACAGCTGTTTGTTTCTTTA CTTGGTTTAGGATTTGGAATTGCCGAACCTATGCTGTCTGGTAACAGTGAC
genomic: TTGAAGAAATGCATCCATCTGATCTTTTTGGACAGCTGTTTGTTTCTTTAgtaagttctt ... gattatatagCTTGGTTTAGGATTTGGAATTGCCGAACCTATGCTGTCTGGTAACAGTGAC
tgcttataccatttctatacctttctaatcataacctttggttttgattatatagCTTGGTTTAGGATTTGGAATTGCCGAACCTATGCTGTCTGGTAACAGTGACTTCTCGAAGTTATTCTATGACTGCAAGGAGTACATAATTACTGCTTGTC
ttttgattatata TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tttcatcttcgtataagttgactcgatttgattgatatgtactgatgcttataccatttctatacctttctaatcataacctttggttttgattatatagCTTGGTTTAGGATTTGGAATTGCCGAACCTATGCTGTCTGGTAACAGTGACTTCTCGAAGTTATTCTATGACTGCAAGGAGTACATAATTACTGCTTGTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- -catcttc
- - - - - - - - - - - - - - - - tgatatg
- - - - - - - - - - - - - - - - - - - - -ctgatgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - acctttg