1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...aaattaaaacacagaaatgtcactccctgaatctaaatccttaactcatgacaacatgtgaagtgaaatgaatgatgtgtttttgtgcaactcatggcagCTGGAGCAGTCGATGCATACGCCATGGTTGATTCGTTCAAGATTCATGAAAAAGTGAACTCTCAAATCTTCACTGGTGTGATGGCCTTTGTGATGGGCAT
species | Glycine max |
transcript | GLYMA16G24670.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
tcatgacaacatgtgaagtgaaatgaatgatgtgtttttgtgcaactcatggcagCTGGAGCAGTCGATGCATACGCCATGGTTGATTCGTTCAAGATTCATGAAAAAGTGAACTCTCAAATCTTCACTGGTGTGATGGCCTTTGTGATGGGCAT
aaatgaat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| aaattaaaacacagaaatgtcactccctgaatctaaatccttaactcatgacaacatgtgaagtgaaatgaatgatgtgtttttgtgcaactcatggcagCTGGAGCAGTCGATGCATACGCCATGGTTGATTCGTTCAAGATTCATGAAAAAGTGAACTCTCAAATCTTCACTGGTGTGATGGCCTTTGTGATGGGCAT
- - - aaacaca
- - - - - - - - - - cactccc
- - - - - - - - - - - - - - - - - - - ccttaac
- - - - - - - - - - - - - - - - - - - - - - -tcatgac
- - - - - - - - - - - - - - - - - - - - - - - - - - -acatgtg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgaatga