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...tcacctagaatctttataggctaatcttatttttgtgcattgtacgaaggaagatttggatatcttatttctttcaacaaattatttctttccgatgcagTTATTGGCATATCATCTCACTGTTCTCAGGGGACATAACGTGGACCAGCCTCGTAATCTTGCCAAGAGTGTCACAACGCAATAGAGAATTTTTTGGCATA
species | Glycine max |
transcript | GLYMA09G38460.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: CACAAGTTGAGGACTGTCTTCAACCTGTAATTAATGTGGTTCCATTACAG TTATTGGCATATCATCTCACTGTTCTCAGGGGACATAACGTGGEST: gi|208141306|gb|GD936096.1|GD936096
genomic: CACAAGTTGAGGACTGTCTTCAACCTGTAATTAATGTAGTTCCATTACAGgtatgtttta ... tccgatgcagTTATTGGCATATCATCTCACTGTTCTCAGGGGACATAACGTGG
EST: CACAAGTTGAGGACTGTCTTCAACCTGTAATTAATGTAGTTCCATTACAG TTATTGGCATATCATCTCACTGTTCTCAGGGGACATAACGTGGACCAGCCTEST: gi|192325841|gb|FK018063.1|FK018063
genomic: CACAAGTTGAGGACTGTCTTCAACCTGTAATTAATGTAGTTCCATTACAGgtatgtttta ... tccgatgcagTTATTGGCATATCATCTCACTGTTCTCAGGGGACATAACGTGGACCAGCCT
EST: CACAAGTTGAGGACTGTCTTCAACCTGTAATTAATGTAGTTCCATTACAG TTATTGGCATATCATCTCACTGTTCTCAGGG-ACATAACGTGGACCAGCCTEST: gi|207844864|gb|GD815805.1|GD815805
genomic: CACAAGTTGAGGACTGTCTTCAACCTGTAATTAATGTAGTTCCATTACAGgtatgtttta ... tccgatgcagTTATTGGCATATCATCTCACTGTTCTCAGGGGACATAACGTGGACCAGCCT
EST: CACAAGTTGAGGACTGTCTTCAACCTGTAATTAATGTAGTTCCATTACAG TTATTGGCATATCATCTCACTGTTCEST: gi|58025101|gb|CX711842.1|CX711842
genomic: CACAAGTTGAGGACTGTCTTCAACCTGTAATTAATGTAGTTCCATTACAGgtatgtttta ... tccgatgcagTTATTGGCATATCATCTCACTGTTC
EST: CACAAGTTGAGGACTGTCTTCAACCTGTAATTAATGTAGTTCCATTACAG TTATTGGCATATCATCTCACTGTTCTCAGGGGACATAACGTGGACCAGCCTEST: gi|209696471|gb|BW664020.1|BW664020
genomic: CACAAGTTGAGGACTGTCTTCAACCTGTAATTAATGTAGTTCCATTACAGgtatgtttta ... tccgatgcagTTATTGGCATATCATCTCACTGTTCTCAGGGGACATAACGTGGACCAGCCT
EST: CACAAGTTGAGGACTGTCTTCAACCTGTAATTAATGTAGTTCCATTACAG TTATTGGCATATCATCTCACTGTTCTCAGGGGACATAACGTGGACCAGCCT
genomic: CACAAGTTGAGGACTGTCTTCAACCTGTAATTAATGTAGTTCCATTACAGgtatgtttta ... tccgatgcagTTATTGGCATATCATCTCACTGTTCTCAGGGGACATAACGTGGACCAGCCT
gaaggaagatttggatatcttatttctttcaacaaattatttctttccgatgcagTTATTGGCATATCATCTCACTGTTCTCAGGGGACATAACGTGGACCAGCCTCGTAATCTTGCCAAGAGTGTCACAACGCAATAGAGAATTTTTTGGCATA
ttatttctttcc CT-rich tract
atatcttatttctttc TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tcacctagaatctttataggctaatcttatttttgtgcattgtacgaaggaagatttggatatcttatttctttcaacaaattatttctttccgatgcagTTATTGGCATATCATCTCACTGTTCTCAGGGGACATAACGTGGACCAGCCTCGTAATCTTGCCAAGAGTGTCACAACGCAATAGAGAATTTTTTGGCATA
- - - - - - - - - - - - - - - -tttgtgc