Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...cccattccaaatatgtcctttagagagtgcatggtcctcccttgtgcaaaaatcaaggtggctttattggaataagtttctttatgtctgtcggatgcagGTTCTTGATGCCCTTTTATCTGAATATGAAAAAACTATTCAAGGTCCAGGGAAGTGGCAAAAACTTGCTGTCTTCTTACAACAAAG

Basic information

species Glycine max
transcript GLYMA07G32290.2
intron # 10
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208325767|gb|GE124503.1|GE124503
EST:     TGAGGGCAGCTTGTAATGCTTCTGACGCAAAGATTGATAATGTCGCTAAG                         GTTCTTGATGCCCTTTTATCTGAATATGAAAAAACTATTCAAGGTCCAGGG
genomic: TGAGGGCAGCTTGTAATGCTTCTGACGCAAAGATTGATAATGTCGCTAAGgtaattgttg ... tcggatgcagGTTCTTGATGCCCTTTTATCTGAATATGAAAAAACTATTCAAGGTCCAGGG






















 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gcaaaaatcaaggtggctttattggaataagtttctttatgtctgtcggatgcagGTTCTTGATGCCCTTTTATCTGAATATGAAAAAACTATTCAAGGTCCAGGGAAGTGGCAAAAACTTGCTGTCTTCTTACAACAAAG
                         aataagtttctttat  TA-rich tract