Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|10710114|gb|BF009838.1|BF009838EST: TGTTCAAGTCCCATGATGTTCCCATTGTAGATGCTGACGTTGTCGCTCGC GAGGTGTTAATGAAAGGGAGTGGTGGTTGGAAGAAAGTCGTTGCAGCTTTT
genomic: TGTTCAAGTCCCATGATGTTCCCATTGTAGATGCTGACGTTGTCGCTCGCgtaagttcct ... tactatgcagGAGGTGTTAATGAAAGGGAGTGGTGGTTGGAAGAAAGTCGTTGCAGCTTTT
EST:
gi|151408092|gb|EV277900.1|EV277900EST: TGTTCAAGTCCCATGATGTTCCCATTGTAGATGCTGACGCTGTCGCTCGC GAGGTGTTAATGAAAGGGAGTGGTGGTTGGAAGAAAGTCGTTGCAGCTTTT
genomic: TGTTCAAGTCCCATGATGTTCCCATTGTAGATGCTGACGTTGTCGCTCGCgtaagttcct ... tactatgcagGAGGTGTTAATGAAAGGGAGTGGTGGTTGGAAGAAAGTCGTTGCAGCTTTT
EST:
gi|213610553|gb|DB960606.1|DB960606EST: TGTTCAAGTCCCATGATGTTCCCATTGTAGATGCTGACGTTGTCGCTCGC GAGGTGTTAATGAAAGGGAGTGGTGGTTGGAAGAAAGTCGTTGCAGCTTTT
genomic: TGTTCAAGTCCCATGATGTTCCCATTGTAGATGCTGACGTTGTCGCTCGCgtaagttcct ... tactatgcagGAGGTGTTAATGAAAGGGAGTGGTGGTTGGAAGAAAGTCGTTGCAGCTTTT
EST:
gi|192333768|gb|FK025827.1|FK025827EST: TGTTCAAGTCCCATGATGTTCCCATTGTAGATGCTGACGTTGTCGCTCGC GAGGTGTTAATGAAAGGGAGTGGTGGTTGGAAGAAAGTCGTTGCAGCTTTT
genomic: TGTTCAAGTCCCATGATGTTCCCATTGTAGATGCTGACGTTGTCGCTCGCgtaagttcct ... tactatgcagGAGGTGTTAATGAAAGGGAGTGGTGGTTGGAAGAAAGTCGTTGCAGCTTTT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
gtaagttccttctcccttttttcaatttcggtcaaattaaactctgtgtctgtgagtgattactggaatactatgcagGAGGTGTTAATGAAAGGGAGTGGTGGTTGGAAGAAAGTCGTTGCAGCTTTTGGGGACGAAATTCTTCTTGAAAATGGAGAAGTCAATAGACCCAGGCTTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT