Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|26056358|gb|CA799272.1|CA799272EST: GTCTTGGTTCGGATACGCTCTTCTCAATGGCGCTTCGGTTCCCTGCGCAG GCAGCTGGTGCTGCGGGTGGTGCAATGGCAATTATGGAAGTGATTCCTGCG
genomic: GTCTTGGTTCGGATACGCTCTTCTCAATGGCGCTTCGGTTCCCTGCGCAGgtttgttgct ... ttgtgaacagGCAGCTGGTGCTGCGGGTGGTGCAATGGCAATTATGGAAGTGATTCCTGCG
EST:
gi|4284910|gb|AI440840.1|AI440840EST: GTCTTGGTTCGGATACGCTCTTCTCAATGGCGCTTCGGTTCCCTGCGCAG GCAGCTGGTGCTGCGGGTGGTGCAATGGCAATTATGGAAGTGATTCCTGCG
genomic: GTCTTGGTTCGGATACGCTCTTCTCAATGGCGCTTCGGTTCCCTGCGCAGgtttgttgct ... ttgtgaacagGCAGCTGGTGCTGCGGGTGGTGCAATGGCAATTATGGAAGTGATTCCTGCG
EST:
gi|7639110|gb|AW733439.1|AW733439EST: GTCTTGGTTCGGATACGCTCTTCTCAATGGCGCTTCGGTTCCCTGCGCAG GCAGCTGGTGCTGCGGGTGGTGCAATGGCAATTATGGAAGTGATTCCTGCG
genomic: GTCTTGGTTCGGATACGCTCTTCTCAATGGCGCTTCGGTTCCCTGCGCAGgtttgttgct ... ttgtgaacagGCAGCTGGTGCTGCGGGTGGTGCAATGGCAATTATGGAAGTGATTCCTGCG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
cagaaaagtagcaccaaaaatgccttagaaactgcttctaagttttattctgatatgaattgtgcaaggaatttttgatggatggttgagttgtgaacagGCAGCTGGTGCTGCGGGTGGTGCAATGGCAATTATGGAAGTGATTCCTGCGAAGTACAGGCACATGATTGGGGGGCCTTCTTTGAAAGTGGATTTGCACA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA