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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttagttgctctctaatgcttccttgctttgaattatagcttccatgtgtttgaaatttttattctttcttacgtggatgaataaagttttcgcctttagGATCCAAACCATGTTGGTGAAACAAACAAGGACAATGGGAGTGGTCCTATTTCTTCCCCAGTTCCACAGCCACAACCACAACCTTTGCCCAAAGTGATGA

Basic information

species Glycine max
transcript GLYMA18G44610.1
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgtgtttgaaatttttattctttcttacgtggatgaataaagttttcgcctttagGATCCAAACCATGTTGGTGAAACAAACAAGGACAATGGGAGTGGTCCTATTTCTTCCCCAGTTCCACAGCCACAACCACAACCTTTGCCCAAAGTGATGA
                     ttcttac  putative branch site (score: 2)
                                          ttttcgccttt  putative PPT
     ttgaaatttttattct  TA-rich tract