1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...ttttacttttttactctggagtctgaaatcacattgttacgaattaaaagttatgacaaaccatggctcatgttggtctgaagatactgcttgtgtgcagGTCAATCCCATGATCTCAAAAAAGAAGATTGCAAGGAAACAAGATCACTGGTTGTTTGCTTTGGGGAAATGTTAATAGACTTTGTTCCAACGGTGGGAGG
species | Glycine max |
transcript | GLYMA16G32530.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: ACACCTTCCATTGCATCATCATTCATAAATGGCTCATCCCACCTCATCAG GTCAATCCCATGATCTCAAAAAAGAAGATTGCAAGGAAACAAGATCACTGGEST: gi|15815232|gb|BI787507.1|BI787507
genomic: ACACCTTCCATTGCATCATCATTCATAAATGGCTCATCCCACCTCATCAGgttttgtcac ... ttgtgtgcagGTCAATCCCATGATCTCAAAAAAGAAGATTGCAAGGAAACAAGATCACTGG
EST: CACCTTCCATTGCATCATCATTCATAAATGGCTCATCCCACCTCATCAG GTCAATCCCATGATCTCAAAAAAGAAGATTGCAAGGAAACAAGATCACTGG
genomic: CACCTTCCATTGCATCATCATTCATAAATGGCTCATCCCACCTCATCAGgttttgtcac ... ttgtgtgcagGTCAATCCCATGATCTCAAAAAAGAAGATTGCAAGGAAACAAGATCACTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ttttacttttttactctggagtctgaaatcacattgttacgaattaaaagttatgacaaaccatggctcatgttggtctgaagatactgcttgtgtgcagGTCAATCCCATGATCTCAAAAAAGAAGATTGCAAGGAAACAAGATCACTGGTTGTTTGCTTTGGGGAAATGTTAATAGACTTTGTTCCAACGGTGGGAGG
- - - - - - - - - gagtctg
- - - - - - - - - - gtctgaa
- - - - - - - - - - - - - aatcaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - -acaaacc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tcatgtt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gatactg