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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtcattctgttgtcgaacctctgttagctgaaaatgtagaatgggtatcaagtatgtggaagcttgaatatctttatttgagttatgcaaacctatccaaagcatttcattggctacacactctccaatctcttccttctttgacccacctatatttgtcagACTGCACACTCCCTCACTATAATGAACCATCCTTGCTCAACTTCTCATCTCTGCAAACTCTCCATCTTTCCCGTACTCATTATTCCCCTGCCATTTCTTT

Basic information

species Glycine max
transcript GLYMA16G31440.1
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cattggctacacactctccaatctcttccttctttgacccacctatatttgtcagACTGCACACTCCCTCACTATAATGAACCATCCTTGCTCAACTTCTCATCTCTGCAAACTCTCCATCTTTCCCGTACTCATTATTCCCCTGCCATTTCTTT
                               ctttgac  putative branch site (score: 4)
                                           tatatttgt  TA-rich tract