Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|8283268|gb|BE020829.1|BE020829EST: GAGTAGCTCCTGGCATACTTCGACTCTTCTTCCATGACTGCTTTCCTAAT GGATGCGATGCGTCTATATTGTTGAATGGAGACGGTGACGAGAAGCAACAC
genomic: GAGTAGCTCCTGGCATACTTCGACTCTTCTTCCATGACTGCTTTCCTAATgtaagactac ... ctgcaaacagGGATGCGATGCGTCTATATTGTTGAATGGAGACGGTGACGAGAAGCAACAC
EST:
gi|6071932|gb|AW101319.1|AW101319EST: GAGTAGCTCCTGGCATACTTCGACTCTTCTTCCATGACTGCTTTCCTAAT GGATGCGATGCGTCTATATTGTTGAATGGAGACGGTGACGAGAAGCAACAC
genomic: GAGTAGCTCCTGGCATACTTCGACTCTTCTTCCATGACTGCTTTCCTAATgtaagactac ... ctgcaaacagGGATGCGATGCGTCTATATTGTTGAATGGAGACGGTGACGAGAAGCAACAC
EST:
gi|8285695|gb|BE023254.1|BE023254EST: GAGTAGCTCCTGGCATACTTCGACTCTTCTTCCATGACTGCTTTCCTAAT GGATGCGATGCGTCTATATTGTTGAATGGAGACGGTGACGAGAAGCAACAC
genomic: GAGTAGCTCCTGGCATACTTCGACTCTTCTTCCATGACTGCTTTCCTAATgtaagactac ... ctgcaaacagGGATGCGATGCGTCTATATTGTTGAATGGAGACGGTGACGAGAAGCAACAC
EST:
gi|4396950|gb|AI495947.1|AI495947EST: GAGTAGCTCCTGGCATACTTCGACTCTTCTTCCATGACTGCTTTCCTAAT GGATGCGATGCGTCTATATTGNTGAATGGAGACGGT
genomic: GAGTAGCTCCTGGCATACTTCGACTCTTCTTCCATGACTGCTTTCCTAATgtaagactac ... ctgcaaacagGGATGCGATGCGTCTATATTGTTGAATGGAGACGGT
EST:
gi|7925851|gb|AW831877.1|AW831877EST: GAGTAGCTCCTGGCATACTTCGACTCTTCTTCCATGACTGCTTTCCTAAT GGATGCGATGCGTCTATATTGTTGAATGGAGACGGTGACGAGAAGCAACAC
genomic: GAGTAGCTCCTGGCATACTTCGACTCTTCTTCCATGACTGCTTTCCTAATgtaagactac ... ctgcaaacagGGATGCGATGCGTCTATATTGTTGAATGGAGACGGTGACGAGAAGCAACAC
EST:
gi|12774112|gb|BG239039.1|BG239039EST: GAGTAGCTCCTGGCATACTTCGACTCTTCTTCCATGACTGCTTTCCTAAT GGATGCGATGCGTCTATATTGTTGAATGGAGACGGTGACGAGAAGCAACAC
genomic: GAGTAGCTCCTGGCATACTTCGACTCTTCTTCCATGACTGCTTTCCTAATgtaagactac ... ctgcaaacagGGATGCGATGCGTCTATATTGTTGAATGGAGACGGTGACGAGAAGCAACAC
EST:
gi|6566698|gb|AW234332.1|AW234332EST: GAGTAGCTCCTGGCATACTTCGACTCTTCTTCCATGACTGCTTTCCTAAT GGATGCGATGCGTCTATATTGTTGAATGGAGACGGTGACGAGAAGCAACAC
genomic: GAGTAGCTCCTGGCATACTTCGACTCTTCTTCCATGACTGCTTTCCTAATgtaagactac ... ctgcaaacagGGATGCGATGCGTCTATATTGTTGAATGGAGACGGTGACGAGAAGCAACAC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
gaagtataagaaaaagtgatttaagagaaatattttttctttttcaatttccaaataaccttattcaatcgatgatattgatgatttggactgcaaacagGGATGCGATGCGTCTATATTGTTGAATGGAGACGGTGACGAGAAGCAACACCGTGCTAACTTTGGTTTAAGGCAAGAGGCCATTGACGCCATTGAAAACC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG