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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgattcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcattgatatatcctaatcggtttcggaaaggtgggccagaatggggggattgtctcagATATACCCGGATTATGTGCGTCCATTGTATCCGTCAATCCTCCTCTAGATATTTCTCTGGATGTGTCAACAATGAGGAATGTTGCTTGCTATATGAGCCA

Basic information

species Glycine max
transcript GLYMA16G18500.1
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgatatatcctaatcggtttcggaaaggtgggccagaatggggggattgtctcagATATACCCGGATTATGTGCGTCCATTGTATCCGTCAATCCTCCTCTAGATATTTCTCTGGATGTGTCAACAATGAGGAATGTTGCTTGCTATATGAGCCA
       tcctaat  putative branch site (score: 2)
                                              ttgtctc  putative PPT