Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|120495413|gb|EH223580.1|EH223580EST: GCCTTTGGTTTCAACCATTTTTGTCTTGCTTCTGCTTCTGGTGGCCACTG AGATGATGGGGCCAACAATGGTGGCAGAAGCAAGAACTTGTGAGTCTCAGA
genomic: GCCTTTGGTTTCAACCATTTTTGTCTTGCTTCTGCTTCTGGTGGCCACTGgtaggccttt ... acttgagcagAGATGATGGGGCCAACAATGGTGGCAGAAGCAAGAACTTGTGAGTCTCAGA
EST:
gi|31311357|gb|CD396560.1|CD396560EST: GCCTTTGGTTTCAACCATTTTTGTCTTGCTTCTGCTTCTGGTGGCCACTG AGATGATGGGGCCAACAATGGTGGCAGAAGCAAGAACTTGTGAGTCTCAGA
genomic: GCCTTTGGTTTCAACCATTTTTGTCTTGCTTCTGCTTCTGGTGGCCACTGgtaggccttt ... acttgagcagAGATGATGGGGCCAACAATGGTGGCAGAAGCAAGAACTTGTGAGTCTCAGA
EST:
gi|9902537|gb|BE611505.1|BE611505EST: AACCATTTTTGTCTTGCTTCTGCTTCTGGTGGCCACTG AGATGATGGGGCCAACAATGGTGGCAGAAGCAAGAACTTGTGAGTCTCAGA
genomic: AACCATTTTTGTCTTGCTTCTGCTTCTGGTGGCCACTGgtaggccttt ... acttgagcagAGATGATGGGGCCAACAATGGTGGCAGAAGCAAGAACTTGTGAGTCTCAGA
EST:
gi|10710082|gb|BF009806.1|BF009806EST: GCCTTTGGTTTCAACCATTTTTGTCTTGCTTCTGCTTCTGGTGGCCACTG AGATGATGGGGCCAACAATGGTGGCAAAAGCAAGAACTTGTGAGTCTCAGA
genomic: GCCTTTGGTTTCAACCATTTTTGTCTTGCTTCTGCTTCTGGTGGCCACTGgtaggccttt ... acttgagcagAGATGATGGGGCCAACAATGGTGGCAGAAGCAAGAACTTGTGAGTCTCAGA
EST:
gi|15285300|gb|BI469191.1|BI469191EST: GCCTTTGGTTTCAACCATTTTTGTCTTGCTTCTGCTTCTGGTGGCCACTG AGATGATGGGGCCAACAATGGTGGCAGAAGCAAGAACTTGTGAGTCTCAGA
genomic: GCCTTTGGTTTCAACCATTTTTGTCTTGCTTCTGCTTCTGGTGGCCACTGgtaggccttt ... acttgagcagAGATGATGGGGCCAACAATGGTGGCAGAAGCAAGAACTTGTGAGTCTCAGA
EST:
gi|12773315|gb|BG238242.1|BG238242EST: GCCTTTGGTTTCAACCATTTTTGTCTTGCTTCTGCTTCTGGTGGCCACTG AGATGATGGNGGCCAACCAATGGTGGCNAGAAGCAAGAACTTGTGAGTCTC
genomic: GCCTTTGGTTTCAACCATTTTTGTCTTGCTTCTGCTTCTGGTGGCCACTGgtaggccttt ... acttgagcagAGATGATGG-GGCCAA-CAATGGTGGC-AGAAGCAAGAACTTGTGAGTCTC
EST:
gi|13312173|gb|BG405833.1|BG405833EST: GCCTTTGGTTTCAACCATTTTTGTCTTGCTTCTGCTTCTGGTGGCCACTG AGATGATGGGGCCAACAATGGTGGCAGAAGCAAGAACTTGTGAGTCTCAGA
genomic: GCCTTTGGTTTCAACCATTTTTGTCTTGCTTCTGCTTCTGGTGGCCACTGgtaggccttt ... acttgagcagAGATGATGGGGCCAACAATGGTGGCAGAAGCAAGAACTTGTGAGTCTCAGA
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.tcaacttggtagtgtcaaattgttaataacttgtgttggtttatgacttgagcagAGATGATGGGGCCAACAATGGTGGCAGAAGCAAGAACTTGTGAGTCTCAGAGCCACCGTTTCAAGGGGCCATGTTTGAGTGACACCAACTGTGGCTCTGT
taataac putative branch site (score: 1)
aaattgttaataactt TA-rich tract