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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...aggttataaattaatattttgtttgtaaatattgttaatggatgttaaaataatttaacttctctacatggcgcttaattgattatgttgtgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGACCAAGGGATCTACAATAGATTGACTTGGTGGGAGCAGGTAGACAATGGAA

Basic information

species Glycine max
transcript GLYMA16G02540.1
intron # 1
splice site 3'
intron type U12 (go to U12 genes for details)

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA16G02540.1 (Glycine max), 3'ss of exon 1
lower sequence: LOC_Os04g47970.1 (Oryza sativa), 3'ss of exon 1
aggttataaattaatattttgtttgtaaatattg--ttaatggatgttaaaataatttaacttctctacatggcgcttaattgattatgttgtgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGACCAAGGGATCTACAATAGATTGACTTGGTGGGAGCAGGTAGACAATGGAA
   | | | | | | |              ||||  || |    |   | ||  ||||  || |         |     | | | |   || |      ||| | ||||| || ||||||||||||||||| |||||||| ||||| || ||||| ||||| || |||||||||||||||||||||||  | |||||||| |
-cttgacatagtgagaacagagaaaactgcattggattcaattgtagaagaaagattttcctccctattgccactgcctactaactgaattttaattg-cagATGACATACCATTTTTTTCACTGGAAGAAGGGAACTCCGTTTGCTGATGACCAGGGGATGTATAATAGATTGACTTGGTGGGAGCAAATGGACAATGGGA

upper sequence: GLYMA16G02540.1 (Glycine max), 3'ss of exon 1
lower sequence: LOC_Os02g45180.1 (Oryza sativa), 3'ss of exon 1
aggttataaattaatatttt-gtttgtaaatattgttaatggatgttaaaataatttaacttctct-acatggcgcttaattgattatgttgtgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGACCAAGGGATCTACAATAGATTGACTTGGTGGGAGCAGGTAGACAATGGAA
   |  |   ||   ||||| ||| | |  | |   ||      | | | |         | |  | |  |  | |||||| || ||  |  | |   |||| | ||||| |||||||| || |||||||| ||||| || ||||| || ||||| || || ||||| | ||||||||||||||||||  | |||||||| |
-actattctctttgcattttcgttagcatttctctatagcatcggatgatacctaccgtgtccaatgatttcccacttaatcgaata-atcttatgtttcagATCACATACCACTTTTTCCATTGGAAGAAGGGAACACCTTTTGCTGATGACCAGGGAATGTACAACACATTGACTTGGTGGGAGCAAATGGACAATGGCA

upper sequence: GLYMA16G02540.1 (Glycine max), 3'ss of exon 1
lower sequence: LOC_Os07g26940.2 (Oryza sativa), 3'ss of exon 1
aggttataaatta-atatttt--gtttgtaaatattgttaat-ggatgttaaaataatttaacttctctacatggcgcttaattgattatgttgtgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGG---AGGACCAAGGGATCTACAATAGATTGACTTGGTGGGAGCAGGTAGACAATGGAA
|||   | | ||| || | |    ||||||    |    | |  | |  ||  |  |  ||   | | ||  |     ||| || | | | || || |    || | || |||||||| || || |||||||| |||||||||||||| |   | |||||||| |||||||| ||| | ||||||||||| ||  | || || |   
agggcttgagttagatgtctacaatttgtagtcctcaacattcagctactagtactacatactgtatttaagtaaattttattttaattttttttggc----agATCACTTATCACTTCTTCCATTGGAAGAAGGGAACTCCATTTGCTGCTGATGACCAAGGCATCTACAACAGACTAACTTGGTGGGAACAAATTGATAACG---

upper sequence: GLYMA16G02540.1 (Glycine max), 3'ss of exon 1
lower sequence: GRMZM2G151009_T01 (Zea mays), 3'ss of exon 1
aggttataaattaatattttgtttgtaaatattgttaatggatgttaaaataatttaacttctctacatggcgctta----attgattatg--ttgtgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGACCAAGGGATCTACAATAGATTGACTTGGTGGGAGCAGGTAGACAATGGAA
 | || || || | ||  |  | ||  |    ||||||   |  ||    ||    |  || || | ||  | |||      | || | ||  |  | |   |||| | ||||| |||||||| || |||||||||||||| || ||||| || ||||| || || ||||| | ||||||||||||||| ||  | |||||||| |
-gtttgtacatgattaggtcctgtgctatc--tgttaa---acatttgtctatggaacattgtccaaataacacttgcgatctggaatgtgaatcctatttttcagATCACATACCACTTTTTCCATTGGAAGAAAGGAACACCTTTTGCTGATGACCAGGGAATGTACAACACATTGACTTGGTGGGAACAAATGGACAATGGCA

upper sequence: GLYMA16G02540.1 (Glycine max), 3'ss of exon 1
lower sequence: GRMZM2G114911_T02 (Zea mays), 3'ss of exon 1
aggttataaattaatattttg--tttgtaaatattgt-taatggatgttaaaataatttaacttctctacatggcgctta----attgattatg--ttgtgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGACCAAGGGATCTACAATAGATTGACTTGGTGGGAGCAGGTAGACAATGGAA
          ||  | | |||  |||  |  || | | || |  |  ||    |||   |  || || | ||  | |||      | || | ||  |  | |   |||| | ||||| |||||||| || |||||||||||||| || ||||| || ||||| || || |||||   ||||||||||||||||||  | || ||||| |
---------tttggtttcttgaattttcatgtactatctattaaacatttctctaagcaactttgtccagataacacttgccatctggaatgtgaatcttatttttcagATCACATACCACTTTTTCCATTGGAAGAAAGGAACACCTTTTGCTGATGACCAGGGAATGTACAACGCATTGACTTGGTGGGAGCAAATGGATAATGGCA

upper sequence: GLYMA16G02540.1 (Glycine max), 3'ss of exon 1
lower sequence: AT1G01230.1 (Arabidopsis thaliana), 3'ss of exon 1
------aggttataaattaatattttgtttgtaaatattgttaatggatgtt-aaaataatttaacttctctacatggcgcttaattgattatgttgtgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGACCAAGGGATCTACAATAGATTGACTTGGTGGGAGCAGGTAGACAATGGAA
       | ||     | || |     |||      |||  ||||   | || |  | ||| | |  | |||   | |   ||  | ||| || ||||     ||||||||| ||||||   || ||||||| |||||||||||| ||||| || |||||||| ||||||||| | || ||||||||||| ||  | ||||||||  
tggcattgcttgattgtcaaaaccaaatttaatctaatttctaattactctttaggaaaatgtga--tgtctgagtagaaatttgtggat-at-ttgt---tgtcagGTAACGTATCACAGCTTCCACTGGATGAAAGGAACTCCTTTTGCAGATGACCAAGGAATCTACAATGGTTTAACTTGGTGGGAACAAATGGACAATGGTC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298193434|gb|HO033868.1|HO033868
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|298196687|gb|HO041430.1|HO041430
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACGCTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|120493329|gb|EH221496.1|EH221496
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|9566033|gb|BE475604.1|BE475604
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|120493066|gb|EH221233.1|EH221233
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|298181456|gb|HO022895.1|HO022895
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|21888311|gb|BQ741524.1|BQ741524
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|120492594|gb|EH220761.1|EH220761
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|298188939|gb|HO035632.1|HO035632
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|13478495|gb|BG507949.1|BG507949
EST:     GCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|120492332|gb|EH220499.1|EH220499
EST:     GTTGATCCCCTGGCATCGCTTGGACCATCGTGA-TCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAGAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|298190914|gb|HO038393.1|HO038393
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|10848088|gb|BF070641.1|BF070641
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|298181363|gb|HO022802.1|HO022802
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|298178907|gb|HO024642.1|HO024642
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|17022343|gb|BM093377.1|BM093377
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|10231577|gb|BE800465.1|BE800465
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|17022282|gb|BM093316.1|BM093316
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|120492338|gb|EH220505.1|EH220505
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|298176062|gb|HO015467.1|HO015467
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTCCACTGGAAGAAAG
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAG
EST: gi|192328377|gb|FK020088.1|FK020088
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATTGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|17963285|gb|BM270036.1|BM270036
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|21256762|gb|BQ453650.1|BQ453650
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|120493535|gb|EH221702.1|EH221702
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|19053555|gb|BM732222.1|BM732222
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|27425384|gb|CA936904.1|CA936904
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|298190779|gb|HO032900.1|HO032900
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
EST: gi|298183428|gb|HO028641.1|HO028641
EST:     GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCT                         GTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC
genomic: GTTGTTCCCCTGGCATCGCTTGGACCATCGTTAATCTCGCACACTTTGCTgtatccttct ... tgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGAC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

taaaataatttaacttctctacatggcgcttaattgattatgttgtgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGACCAAGGGATCTACAATAGATTGACTTGGTGGGAGCAGGTAGACAATGGAA
                         gcgcttaat  putative branch site 
                             ttaattgattatgtt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
aggttataaattaatattttgtttgtaaatattgttaatggatgttaaaataatttaacttctctacatggcgcttaattgattatgttgtgtccatcagGTAACATATCACTTTTTTCACTGGAAGAAAGGAACTCCATTTGCGGAGGACCAAGGGATCTACAATAGATTGACTTGGTGGGAGCAGGTAGACAATGGAA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGCAG
- - - - - - - - - -tgtttgt
- - - - - - - - - - - - - - - - - - - tggatgt
- - - - - - - - - - - - - - - - - - - - - - - aaaataa