Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|298181627|gb|HO025802.1|HO025802EST: AAAGAGTGCATTCTCCAGTGCCTCTTGTCTCAGAAGAAAGACATTCAAAG GAAGCTTGCAGCCCATGCTGCTCAGCAGAGGCAAGAAAAAGAGGAGGAAGA
genomic: AAAGAGTGCATTCTCCAGTGCCTCTTGTCTCAGAAGAAAGACATTCAAAGgtaacaacac ... aataaaatagGAAGCTTGCAGCCCATGCTGCTCAGCAGAAGCAAGAAAAAGAGGAGGAAGA
EST:
gi|298186313|gb|HO036946.1|HO036946EST: AAAGAGTGCATTCTCCAGTGCCTCTTGTCTCAGAAGAAAGACATTCAAAG GAAGCTTGCAGCCCATGCTGCTCAGCAGAAGCAAGGAAAAGAGGAGGAAGA
genomic: AAAGAGTGCATTCTCCAGTGCCTCTTGTCTCAGAAGAAAGACATTCAAAGgtaacaacac ... aataaaatagGAAGCTTGCAGCCCATGCTGCTCAGCAGAAGCAAGAAAAAGAGGAGGAAGA
EST:
gi|298187703|gb|HO031660.1|HO031660EST: AAAGAGTGCATTCTCCAGTGCCTCTTGTCTCAGAAGAAAGACATTCAAAG GAAGCTTGCAGCCCATGCTGCTCAGCAGAAGCAAGAAAAAGAGGAGGAAGA
genomic: AAAGAGTGCATTCTCCAGTGCCTCTTGTCTCAGAAGAAAGACATTCAAAGgtaacaacac ... aataaaatagGAAGCTTGCAGCCCATGCTGCTCAGCAGAAGCAAGAAAAAGAGGAGGAAGA
EST:
gi|192325813|gb|FK018035.1|FK018035EST: AAAGAGTGCATTCTCCAGTGCCTCTTGTCTCAGAAGAAAGACATTCAAAG GAAGCTTGCAGCCCATGCTGCTCAGCAGAAGCAAGAAAAAGAGGAGGAAGA
genomic: AAAGAGTGCATTCTCCAGTGCCTCTTGTCTCAGAAGAAAGACATTCAAAGgtaacaacac ... aataaaatagGAAGCTTGCAGCCCATGCTGCTCAGCAGAAGCAAGAAAAAGAGGAGGAAGA
EST:
gi|163926446|gb|EH038478.1|EH038478EST: AAAGAGTGCATTCTCCAGTGCCTCTTGTCTCAGAAGAAAGACATTCAAAG GAAGCTTGCAGCCCATGCTGCTCAGCAGAAGCAAGAAAAAGAGGAGGAAGA
genomic: AAAGAGTGCATTCTCCAGTGCCTCTTGTCTCAGAAGAAAGACATTCAAAGgtaacaacac ... aataaaatagGAAGCTTGCAGCCCATGCTGCTCAGCAGAAGCAAGAAAAAGAGGAGGAAGA
EST:
gi|6502167|gb|AW203540.1|AW203540EST: AAAGAGTGCATTCTCCAGTGCCTCTTGTCTCAGAAGAAAGACATTCAAAG GAAGCTTGCAGCCCATGCTGCTCAGCAGAAGCAAGAAAAAGAGGAGGAAGA
genomic: AAAGAGTGCATTCTCCAGTGCCTCTTGTCTCAGAAGAAAGACATTCAAAGgtaacaacac ... aataaaatagGAAGCTTGCAGCCCATGCTGCTCAGCAGAAGCAAGAAAAAGAGGAGGAAGA
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.ggatataatgactgttatgttgtgaaccttaacaatgtggttgtgaataaaatagGAAGCTTGCAGCCCATGCTGCTCAGCAGAAGCAAGAAAAAGAGGAGGAAGAAGAGAAGTTGATGTTACAAAAGGCTAAAGAGCTTGATGCATTTGATCAA
ccttaac putative branch site (score: 3)
ttgtgaataaaata TA-rich tract