1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtatgtagtactacccttttctattttcttcttttcttttcttttttccccaattttttttaattgtttttttgtttttctttgtttacttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGGGATATGAAACCAGAGACCTTTGCCAGTTTAGTCTCTGCTCTGCTCTAT
species | Glycine max |
transcript | GLYMA14G24270.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|151405517|gb|EV275331.1|EV275331
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTTAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|6914510|gb|AW396040.1|AW396040
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|37995705|gb|CF807294.1|CF807294
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|10233865|gb|BE802753.1|BE802753
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|192331116|gb|FK020336.1|FK020336
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|19346754|gb|BM891634.1|BM891634
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|298182182|gb|HO026357.1|HO026357
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|298176982|gb|HO023343.1|HO023343
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|298191795|gb|HO035877.1|HO035877
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|151410578|gb|EV280393.1|EV280393
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|207769518|gb|GD742112.1|GD742112
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: CTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|298198899|gb|HO042262.1|HO042262
genomic: CTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|12774129|gb|BG239056.1|BG239056
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|193678148|gb|FK618398.1|FK618398
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGEST: gi|16347157|gb|BI972752.1|BI972752
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|23726885|gb|BU761446.1|BU761446
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|17519828|gb|BM188870.1|BM188870
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|26059647|gb|CA802561.1|CA802561
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|4395893|gb|AI494890.1|AI494890
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|298191024|gb|HO038503.1|HO038503
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|7926292|gb|AW832318.1|AW832318
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|16348147|gb|BI973742.1|BI973742
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGEST: gi|298177393|gb|HO027174.1|HO027174
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
EST: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT GTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagta ... cttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAG
ttttccccaattttttttaattgtttttttgtttttctttgtttacttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGGGATATGAAACCAGAGACCTTTGCCAGTTTAGTCTCTGCTCTGCTCTAT
ttttaat putative branch site (score: 3)
ttgtttttttgttttt CT-rich tract
aattttttttaattgt TA-rich tract