Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatgtagcgctaccctttactctttttcttttgtttttttctttttctttttctaccattttttaaattgtttttgttctctctttgtttacttttttttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAGGGATATGAAACCAGAGACCTTTGCCAGCTTAGTCTCTGCTCTGCTTTAT

Basic information

species Glycine max
transcript GLYMA13G10130.1
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA13G10130.1 (Glycine max), 3'ss of exon 1
lower sequence: GRMZM2G092975_T01 (Zea mays), 3'ss of exon 2
gtatgtagcgctaccctttactctttttcttttgtttttttctttttctttttctaccattttttaaattgtttttgttctctctttgtttacttttttttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAGGGATATGAAACCAGAGACCTTTGCCAGCTTAGTCTCTGCTCTGCTTTAT
                 | | ||    |       || |  | |  |||      ||    | ||   ||  ||| |    ||     |||  |   |   | |  ||||| |||||  | || ||| ||||||| ||||||||||| || || |||||||| ||||| || ||||||||||||||| | |||||||| || || || 
----------------gtgagtcgcagttgccgaattctcccctcctctacac--acgggctgttgccttcgtttcggcagcttaggattt--tgggtccctctgcagGTACCAGCGGTTGGTGTTCAGGCACAAGCTGTATCAGCTGCGGGAGGAGAGGGACATGAAGCCCGAGACCTTTGCCAGCCTTGTCTCTGCGCTCCTCTAC

upper sequence: GLYMA13G10130.1 (Glycine max), 3'ss of exon 1
lower sequence: GRMZM2G045371_T02 (Zea mays), 3'ss of exon 2
gtatgtagc-gctaccctttactctttttcttttgtttttttctttttctttttctaccattttttaaattgtttttgttctctctttgtttacttttttttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAGGGATATGAAACCAGAGACCTTTGCCAGCTTAGTCTCTGCTCTGCTTTAT
||  || || | | ||   | |||     |            || ||   ||   | |   |  |||    ||||| | || |||                      ||||| |||||  | || ||| ||||||| ||||||||||| || || |||||||| ||||| || ||||||||||||||| | |||||||| || || || 
gtgagtcgcagttgccgaattctccccgcccgcccccacggcctgttctcttcggttcagctgcttagg--gttttaggtccctccgc-------------------agGTACCAGCGGTTGGTCTTCAGGCACAAGCTGTATCAGCTGCGCGAGGAGAGGGACATGAAGCCTGAGACCTTTGCCAGCCTTGTCTCTGCGCTCCTCTAC

upper sequence: GLYMA13G10130.1 (Glycine max), 3'ss of exon 1
lower sequence: Vv18s0001g02260.t01 (Vitis vinifera), 3'ss of exon 2
gtatgtagcgctacc--ctttactctttttcttttgtttttttctttttctttttctaccattttttaaattgtttttgttctctctttgtttacttttttttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAGGGATATGAAACCAGAGACCTTTGCCAGCTTAGTCTCTGCTCTGCTTTAT
||||| | |        || ||     || | ||  ||||||| ||||  ||| | |     ||||| ||    |||   | |   | |||                 || ||||| || |||||||| ||||||||||||||||||||||| || |||||||||||||| || || |||||||| ||| | || |||||||| ||||||
gtatgaatcatcgattgctctatcgccttgccttcatttttttgttttgttttatttctggattttttaaaaaatttaaattttgatgtgt-----------------agATATCAACGGCTTGTTTTTCGGCACAAACTGTATCAGCTTCGAGAGGAGAGGGATATGAAGCCCGAAACCTTTGCAAGCCTTGTATCTGCTCTTCTTTAT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|58023417|gb|CX710158.1|CX710158
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|298164208|gb|HO013853.1|HO013853
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|298178487|gb|HO024222.1|HO024222
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|14009264|gb|BG725868.1|BG725868
EST:     CACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: CACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|298164143|gb|HO013788.1|HO013788
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGGAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|254322957|gb|GR835672.1|GR835672
EST:     AGCTC-TCATCGCTCTCTCTGG-CTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: AGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|26047843|gb|CA784499.1|CA784499
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|192295475|gb|FG987089.1|FG987089
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|58023718|gb|CX710459.1|CX710459
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|4289799|gb|AI441527.1|AI441527
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACANACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|298198213|gb|HO039752.1|HO039752
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|23732782|gb|BU764563.1|BU764563
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|192298335|gb|FG992110.1|FG992110
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|192319626|gb|FK013710.1|FK013710
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|207707900|gb|GD689821.1|GD689821
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGG
EST: gi|192323432|gb|FK016383.1|FK016383
EST:     GACAAGCTCTTCATCGCTCTCCCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAACGTCTTGTTTT
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTT
EST: gi|298170344|gb|HO018968.1|HO018968
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCCTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|254322956|gb|GR835671.1|GR835671
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|209721449|gb|BW671657.1|BW671657
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCACCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|298164572|gb|HO014217.1|HO014217
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|192325391|gb|FK018362.1|FK018362
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|298191360|gb|HO038839.1|HO038839
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|7588683|gb|AW704473.1|AW704473
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|22933839|gb|BU550978.1|BU550978
EST:     CTGGCCTCGCCACCGATGCTCAAACATT                         GTANCAGNGTCTTGTNNNNNGGCACAAACTGTATCAGCNTCGTGAAGAGAG
genomic: CTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|7589196|gb|AW704975.1|AW704975
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|151393124|gb|EV262999.1|EV262999
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|21285997|gb|BQ473868.1|BQ473868
EST:     GACAAGCTCTTCTTTTCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|192331428|gb|FK023391.1|FK023391
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTTGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|208191018|gb|GD989650.1|GD989650
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTT
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTT
EST: gi|209717218|gb|BW657687.1|BW657687
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|120533789|gb|EH261922.1|EH261922
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|207775463|gb|GD746866.1|GD746866
EST:     CTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: CTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|57574580|gb|CX547555.1|CX547555
EST:     TCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: TCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|7588884|gb|AW704670.1|AW704670
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|58019721|gb|CX706463.1|CX706463
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|13240408|gb|BG359717.1|BG359717
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|298197559|gb|HO045038.1|HO045038
EST:     GACAGGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|298163713|gb|HO012446.1|HO012446
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|213613997|gb|DB960962.1|DB960962
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|10238976|gb|BE807864.1|BE807864
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|208079584|gb|GD873686.1|GD873686
EST:     CTGGCCTCGCCACCGATGCTC-AACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: CTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|192297363|gb|FG990669.1|FG990669
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|6847346|gb|AW349636.1|AW349636
EST:     GCCACCGATGNNCAAACATT                         GTATCAGCGTCTTGTTTNNNGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|208208376|gb|GE004741.1|GE004741
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|17400469|gb|BM177251.1|BM177251
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|298165026|gb|HO011075.1|HO011075
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|298172643|gb|HO019683.1|HO019683
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
EST: gi|7684912|gb|AW755560.1|AW755560
EST:     GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATT                         GTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG
genomic: GACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTgtatgtagcg ... tttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ctaccattttttaaattgtttttgttctctctttgtttacttttttttttttaagGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAGGGATATGAAACCAGAGACCTTTGCCAGCTTAGTCTCTGCTCTGCTTTAT
               ttgtttttgttctctc  CT-rich tract
                           tctctttgtttacttt  TA-rich tract