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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...caaacactgtatgtatgtaaatagcaagtggcagtgatgaaaacgagagaggtaaacattgaatccggtaaataatgttctaaaaacgaacctcaaaaagAAATTTCCTTTCTTCTTCTTCTGTCAACTCGGTCTCATGGCTCACCCTCGACTCACTAACTCGCTCTCTTCTTCATCCCTTCGCAATCTCAATCCCAAAC

Basic information

species Glycine max
transcript GLYMA11G30030.3
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

agagaggtaaacattgaatccggtaaataatgttctaaaaacgaacctcaaaaagAAATTTCCTTTCTTCTTCTTCTGTCAACTCGGTCTCATGGCTCACCCTCGACTCACTAACTCGCTCTCTTCTTCATCCCTTCGCAATCTCAATCCCAAAC
                                ttctaaa  putative branch site (score: 2)
                       taaataatgttctaaa  TA-rich tract