Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttagtgcccattcccttcttcactcttttattctctcctttaaactctgatttctttcttcttcttccgtgattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCTCTTCCAGGTCAAGAATATTGGCAAAACCCTCGTCTCTCGTACCCAGGGA

Basic information

species Glycine max
transcript GLYMA11G00890.1
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA11G00890.1 (Glycine max), 3'ss of exon 1
lower sequence: LOC_Os03g10340.1 (Oryza sativa), 3'ss of exon 1
-----------------------------------------gttagtg-cccattcccttcttcactcttttattctctcctttaaactctgatttctttcttcttcttccgtgattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCTCTTCCAGGTCAAGAATATTGGCAAAACCCTCGTCTCTCGTACCCAGGGA
                                          |||| |  |||  |||  ||||| | ||     ||   |  || |   ||  || ||  | |  |||      |    |||||  ||||||||||| ||||| |||||||| |||||||||||||| ||  | ||| | ||   ||| || ||||| |||||||| ||  | || ||||| 
gtgagtgccctcctgcccaccgttctctcctcctcctcctgcttagagatccaaaccc--cttcatttttactcgctagtcgctaca---tgggttgttgatgcagctttgcatttcttgcagCGTCGATCCCTTTGCTAAGAAGGACTGGTATGATATCAAGGCCCCGTCGGTGTTCAATGTGCGGAACATCGGCAAGACCCTCGTGTCCAGGACACAGGGT
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298180407|gb|HO021960.1|HO021960
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|207762830|gb|GD734713.1|GD734713
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|6072640|gb|AW102027.1|AW102027
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|24135455|gb|BU925965.1|BU925965
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|298168802|gb|HO009732.1|HO009732
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCCAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|209702288|gb|BW652368.1|BW652368
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|15813962|gb|BI786237.1|BI786237
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|6072903|gb|AW102290.1|AW102290
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|298174443|gb|HO014588.1|HO014588
EST:     GGAAAGAATAAGAGGATTTCTAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|8826958|gb|BE210688.1|BE210688
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|298179710|gb|HO024925.1|HO024925
EST:     GGAAAGAATAAGAGGATTTCTAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|298170667|gb|HO019291.1|HO019291
EST:     GGAAAGAATAAGAGGATTTCTAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|23727546|gb|BU761807.1|BU761807
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|193608814|gb|FK566032.1|FK566032
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCACGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|207762323|gb|GD734262.1|GD734262
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|192307342|gb|FK000726.1|FK000726
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|298194378|gb|HO041026.1|HO041026
EST:     GGAAAGAATAAGAGGATTTCTAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|4292422|gb|AI437760.1|AI437760
EST:     AAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: AAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|37995080|gb|CF806669.1|CF806669
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|298193302|gb|HO033736.1|HO033736
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|298187904|gb|HO031861.1|HO031861
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|19053253|gb|BM731920.1|BM731920
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|23727433|gb|BU761746.1|BU761746
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|298187155|gb|HO034304.1|HO034304
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|7685314|gb|AW755962.1|AW755962
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|207755950|gb|GD728431.1|GD728431
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAGAGAAGGGTGGCAAGAAGAGAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGG
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGG
EST: gi|4313563|gb|AI460682.1|AI460682
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|17021860|gb|BM092894.1|BM092894
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|11688279|gb|BF595955.1|BF595955
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|207703727|gb|GD686291.1|GD686291
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|19269561|gb|BM885817.1|BM885817
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|213607261|gb|DB957125.1|DB957125
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|7285795|gb|AW598282.1|AW598282
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|298176257|gb|HO015662.1|HO015662
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|192317788|gb|FK010178.1|FK010178
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|193327655|gb|FK297358.1|FK297358
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|23727850|gb|BU761961.1|BU761961
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|51335530|gb|CO979396.1|CO979396
EST:     GGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCNNN
genomic: GGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|192308958|gb|FK001734.1|FK001734
EST:     CAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: CAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|193458171|gb|FK422490.1|FK422490
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|23064624|gb|BU579397.1|BU579397
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
EST: gi|4437091|gb|AI522956.1|AI522956
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttttattctctcctttaaactctgatttctttcttcttcttccgtgattccacagCGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCTCTTCCAGGTCAAGAATATTGGCAAAACCCTCGTCTCTCGTACCCAGGGA
                   ctctgat  putative branch site (score: 4)
                         tttctttcttcttctt  CT-rich tract
             tttaaact  TA-rich tract