1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtatattaattcacactgattttagttttatttagtttggtctatgtttgtgctattttttttttttgcatctgaatattgagtttgtgttggcatagGGTGGAGATGTTCCTTGGTCTGAAATGCTAGGCACATTTTCCCTCTCCGTCGGTGCTGCT
species | Glycine max |
transcript | GLYMA10G37560.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CCTCTATGGCAGTCTTTGCCGTTTATTATAGATTCTCCTGGCAAATGGAG GGTGGAGATGTTCCTTGGTCTGAAATGCTAGGCACAEST: gi|192307275|gb|FK002367.1|FK002367
genomic: CCTCTATGGCAGTCTTTGCCGTTTATTATAGATTCTCCTGGCAAATGGAGgtatattaat ... gttggcatagGGTGGAGATGTTCCTTGGTCTGAAATGCTAGGCACA
EST: CCTCTATGGCAGTCTTTGCCGTTTATTATAGATTCTCCTGGCAAATGGAG GGTGGAGATGTTCCTTGGTCTGAAATGCTAGGCACATTTTCCCTCTCCGTCEST: gi|18733872|gb|BM527861.1|BM527861
genomic: CCTCTATGGCAGTCTTTGCCGTTTATTATAGATTCTCCTGGCAAATGGAGgtatattaat ... gttggcatagGGTGGAGATGTTCCTTGGTCTGAAATGCTAGGCACATTTTCCCTCTCCGTC
EST: CCTCTATGGCAGTCTTTGCCGTTTATTATAGATTCTCCTGGCAAATGGAG GGTGGAGATGTTCCTTGGTCTGAAATGCTAGGCACATTTTCCCTCTCCGTC
genomic: CCTCTATGGCAGTCTTTGCCGTTTATTATAGATTCTCCTGGCAAATGGAGgtatattaat ... gttggcatagGGTGGAGATGTTCCTTGGTCTGAAATGCTAGGCACATTTTCCCTCTCCGTC
atgtttgtgctattttttttttttgcatctgaatattgagtttgtgttggcatagGGTGGAGATGTTCCTTGGTCTGAAATGCTAGGCACATTTTCCCTCTCCGTCGGTGCTGCT
tattttttttttttgc TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtatattaattcacactgattttagttttatttagtttggtctatgtttgtgctattttttttttttgcatctgaatattgagtttgtgttggcatagGGTGGAGATGTTCCTTGGTCTGAAATGCTAGGCACATTTTCCCTCTCCGTCGGTGCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT