1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
...aagttacatttatgcacgtcattataattgtttttgtccgtacttcgaaatttatatcattggctcactcgccaatttttatggttgtttactcttacagGGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAAATG
species | Glycine max |
transcript | GLYMA08G05030.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAG GGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAAEST: gi|192296041|gb|FG993404.1|FG993404
genomic: CGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAGgttttcctct ... actcttacagGGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAA
EST: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAG GGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAAEST: gi|192325065|gb|FK016176.1|FK016176
genomic: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAGgttttcctct ... actcttacagGGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAA
EST: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAG GGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAAEST: gi|15816027|gb|BI788302.1|BI788302
genomic: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAGgttttcctct ... actcttacagGGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAA
EST: GATCGATCAAGCATCAG GGAGCTTTGAGGGTTGATTCTCTGGTGTAGTAGCAATCAGCACAATAGAAAEST: gi|254326846|gb|GR836455.1|GR836455
genomic: GATCGATCAAGCATCAGgttttcctct ... actcttacagGGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAA
EST: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAG GGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAAEST: gi|209716428|gb|BW653869.1|BW653869
genomic: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAGgttttcctct ... actcttacagGGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAA
EST: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAG GGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAAEST: gi|209712046|gb|BW674191.1|BW674191
genomic: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAGgttttcctct ... actcttacagGGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAA
EST: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAG GGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAAEST: gi|14125023|gb|BG789461.1|BG789461
genomic: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAGgttttcctct ... actcttacagGGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAA
EST: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAG GGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAAEST: gi|192309316|gb|FK000524.1|FK000524
genomic: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAGgttttcctct ... actcttacagGGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAA
EST: TCTCTGTTCTCTCTCATCTCATCGGATCGATCAAGCATCAG GGAGCTTTGAGGGTTGATTCTCTGGTGTAGTAGCAATCAGCACAATAGAAAEST: gi|254313714|gb|GR831343.1|GR831343
genomic: TCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAGgttttcctct ... actcttacagGGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAA
EST: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAG GGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAAEST: gi|298172847|gb|HO019831.1|HO019831
genomic: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAGgttttcctct ... actcttacagGGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAA
EST: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAG GGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAAEST: gi|17153552|gb|BM143485.1|BM143485
genomic: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAGgttttcctct ... actcttacagGGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAA
EST: GATCGATCAAGCATCAG GGAGCTTTGAGGGTTGATTCTCTGGTGTAGTAGCAATCAGCACAATAGAAAEST: gi|213604953|gb|DB956328.1|DB956328
genomic: GATCGATCAAGCATCAGgttttcctct ... actcttacagGGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAA
EST: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAG GGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAAEST: gi|192330755|gb|FK022018.1|FK022018
genomic: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAGgttttcctct ... actcttacagGGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAA
EST: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAG GGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAAEST: gi|24205916|gb|BU965169.1|BU965169
genomic: CTCGCTTCTTCTCTGTTCTCTCTCATCTCCTCAGATCGATCAAGCATCAGgttttcctct ... actcttacagGGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAA
EST: TCTCATCTCATCGGATCGATCAAGCATCAG GGAGCTTTGAGGGTTGATTCTCTGGTGTAGTAGCAATCAGCACAATAGAAAEST: gi|213599556|gb|DB968353.1|DB968353
genomic: TCTCATCTCCTCAGATCGATCAAGCATCAGgttttcctct ... actcttacagGGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAA
EST: GATCAAGCATCAG GGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAAEST: gi|23727320|gb|BU761687.1|BU761687
genomic: GATCAAGCATCAGgttttcctct ... actcttacagGGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAA
EST: GATCGATCAAGCATCAG GGAGCTTTGAGGGTTGATTCTCTGGTGTAGTAGCAATCAGCACAATAGAAA
genomic: GATCGATCAAGCATCAGgttttcctct ... actcttacagGGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAA
cgaaatttatatcattggctcactcgccaatttttatggttgtttactcttacagGGGGCTTTGAGGGTTGATTCTCTGGTGTGGTAGCAATCAGCACAATAGAAAATG
ggctcac putative branch site (score: 3)
tttactctt putative PPT
tttatatcatt TA-rich tract