1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
...aaacttagttaacaacaaaaaattatgcatccaagtgataattgataaatgaagatcatatattcgtgcctaactcctaacatgcttattttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGAGCACCAAGAAAATCCTAATAATGGGAGGCACCAGGTTTATTGGTGTGT
species | Glycine max |
transcript | GLYMA03G38930.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|120534298|gb|EH262431.1|EH262431
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|120534123|gb|EH262256.1|EH262256
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|120534506|gb|EH262639.1|EH262639
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|209697177|gb|BW672942.1|BW672942
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|10232858|gb|BE801746.1|BE801746
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|213606521|gb|DB971317.1|DB971317
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|120496123|gb|EH224290.1|EH224290
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|213608598|gb|DB967101.1|DB967101
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|120531123|gb|EH259256.1|EH259256
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|213617909|gb|DB967299.1|DB967299
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|15287169|gb|BI471060.1|BI471060
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|213617923|gb|DB967650.1|DB967650
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|209708025|gb|BW657080.1|BW657080
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|17518618|gb|BM187660.1|BM187660
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|213589761|gb|DB955456.1|DB955456
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|209721697|gb|BW682538.1|BW682538
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|209701640|gb|BW673126.1|BW673126
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|213598124|gb|DB964155.1|DB964155
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|6667229|gb|AW278688.1|AW278688
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|209715536|gb|BW682189.1|BW682189
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|213602138|gb|DB962631.1|DB962631
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|151403281|gb|EV273091.1|EV273091
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|213594012|gb|DB961928.1|DB961928
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|120531139|gb|EH259272.1|EH259272
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|8670059|gb|BE191166.1|BE191166
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|120530457|gb|EH258590.1|EH258590
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|15199948|gb|BI424091.1|BI424091
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|209723821|gb|BW682958.1|BW682958
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|209709384|gb|BW668340.1|BW668340
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|213601152|gb|DB964659.1|DB964659
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|209709945|gb|BW676517.1|BW676517
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|213614000|gb|DB960965.1|DB960965
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|209728486|gb|BW663478.1|BW663478
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|209718791|gb|BW671992.1|BW671992
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|11413480|gb|BF425491.1|BF425491
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|11413168|gb|BF425179.1|BF425179
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|213607233|gb|DB965119.1|DB965119
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|10232367|gb|BE801255.1|BE801255
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|20811439|gb|BQ295917.1|BQ295917
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|209715908|gb|BW650921.1|BW650921
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|6134475|gb|AW132868.1|AW132868
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|213589232|gb|DB957764.1|DB957764
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGEST: gi|209721137|gb|BW665694.1|BW665694
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
EST: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAG TTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
genomic: CTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGgtcctcatca ... ttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCG
taaatgaagatcatatattcgtgcctaactcctaacatgcttattttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGAGCACCAAGAAAATCCTAATAATGGGAGGCACCAGGTTTATTGGTGTGT
tcctaac putative branch site (score: 1)
cttatttt putative PPT
atcatatatt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| aaacttagttaacaacaaaaaattatgcatccaagtgataattgataaatgaagatcatatattcgtgcctaactcctaacatgcttattttgggtacagTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGAGCACCAAGAAAATCCTAATAATGGGAGGCACCAGGTTTATTGGTGTGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - aaaaaat
- - - - - - - - - - - - - gcatcca
- - - - - - - - - - - - - - - - - - - - - - - -aatgaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttcgtgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -acatgct