1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...tagaatgccacttttcttacgtgataatgatatagacactgaatctgtgtcttttttttcttgtccacaaagaaccatagttattcaaacgcatgtttagCTGCCATCGTTGAAACTTATGGAGCTGTTGATTCCTCGGGGAAAAAAAGAATTAG
species | Glycine max |
transcript | GLYMA03G31550.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
tgtgtcttttttttcttgtccacaaagaaccatagttattcaaacgcatgtttagCTGCCATCGTTGAAACTTATGGAGCTGTTGATTCCTCGGGGAAAAAAAGAATTAG
ttttttttctt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tagaatgccacttttcttacgtgataatgatatagacactgaatctgtgtcttttttttcttgtccacaaagaaccatagttattcaaacgcatgtttagCTGCCATCGTTGAAACTTATGGAGCTGTTGATTCCTCGGGGAAAAAAAGAATTAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- gaatgcc
- - - - - - - - - - - - - - - - - - cactgaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaagaacc