1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
...acctctatcactgctgcaaaataaggttgtacttttaaattcaaagcttataaagaaagggtattgattttgacattatgcttatttgtgtattttgcagGGAGTAGCTTCTTCTTTCTAAGTTGACATATGCACATGGCTTCTCTTGGGGATATAGGACTTGCAGCAGCAATAAACATCCTTAGTGCATTTGCCTTCTT
species | Glycine max |
transcript | GLYMA02G43910.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TTCTCTCCCATGTGTCTCCTTCTTTGCTGAGAATTGTTGTGGCAGACAAG GGAGTAGCTTCTTCTTTCTAAGTTGACATATGCACATGGCTTCTCTTGGGGEST: gi|209724339|gb|BW662925.1|BW662925
genomic: TTCTCTCCCATGTGTCTCCTTCTTTGCTGAGAATTGTTGTGGCAGACAAGgtaatgtacc ... tattttgcagGGAGTAGCTTCTTCTTTCTAAGTTGACATATGCACATGGCTTCTCTTGGGG
EST: TTCTCTCCCATGTGTCTCCTTCTTTGCTGAGAATTGTTGTGGCAGACAAG GGAGTAGCTTCTTCTTTCTAAGTTGACATATGCACATGGCTTCTCTTGGGGEST: gi|209701364|gb|BW655960.1|BW655960
genomic: TTCTCTCCCATGTGTCTCCTTCTTTGCTGAGAATTGTTGTGGCAGACAAGgtaatgtacc ... tattttgcagGGAGTAGCTTCTTCTTTCTAAGTTGACATATGCACATGGCTTCTCTTGGGG
EST: TTCTCTCCCATGTGTCTCCTTCTTTGCTGAGAATTGTTGTGGCAGACAAG GGAGTAGCTTCTTCTTTCTAAGTTGACATATGCACATGGCTTCTCTTGGGG
genomic: TTCTCTCCCATGTGTCTCCTTCTTTGCTGAGAATTGTTGTGGCAGACAAGgtaatgtacc ... tattttgcagGGAGTAGCTTCTTCTTTCTAAGTTGACATATGCACATGGCTTCTCTTGGGG
gcttataaagaaagggtattgattttgacattatgcttatttgtgtattttgcagGGAGTAGCTTCTTCTTTCTAAGTTGACATATGCACATGGCTTCTCTTGGGGATATAGGACTTGCAGCAGCAATAAACATCCTTAGTGCATTTGCCTTCTT
ttttgac putative branch site (score: 3)
ttatttgtgtatttt TA-rich tract