1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...gtaatgctgagttttatttgtttattgttagacttgatattgaaggtttttttaattaatttgtgtctgagctttgaacttcaatatatgattgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT
species | Glycine max |
transcript | GLYMA02G05370.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GTAGCACCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAGTG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|192331395|gb|FK019896.1|FK019896
genomic: GTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|9899629|gb|BE608597.1|BE608597
genomic: AGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: CCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|298185233|gb|HO030446.1|HO030446
genomic: CCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|192330329|gb|FK019879.1|FK019879
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|298186516|gb|HO037149.1|HO037149
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAACCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|6070919|gb|AW100306.1|AW100306
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|13480012|gb|BG509355.1|BG509355
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: CGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|16996691|gb|BM086063.1|BM086063
genomic: CGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: GCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|254314706|gb|GR829699.1|GR829699
genomic: GCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: GCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|24205192|gb|BU964445.1|BU964445
genomic: GCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|14011931|gb|BG726853.1|BG726853
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: GCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|207823869|gb|GD794544.1|GD794544
genomic: GCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|298171206|gb|HO016238.1|HO016238
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGGGGCTTAATGCCCCAAAGCATTGGEST: gi|207714384|gb|GD696437.1|GD696437
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: GGGCAGCGTAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|298169563|gb|HO020923.1|HO020923
genomic: GGGCAGCG-AATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|193552807|gb|FK505686.1|FK505686
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: CTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|209713029|gb|BW684323.1|BW684323
genomic: CTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|192306160|gb|FG995024.1|FG995024
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|42723142|gb|CK769041.1|CK769041
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|7686422|gb|AW757070.1|AW757070
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: GCAGCAACGGAAGCTCTATCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|298185840|gb|HO031001.1|HO031001
genomic: GCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|208174091|gb|GD968570.1|GD968570
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|24136699|gb|BU927209.1|BU927209
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: TAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|209711384|gb|BW665355.1|BW665355
genomic: TAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|24205136|gb|BU964389.1|BU964389
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|298166568|gb|HO010007.1|HO010007
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTT-GGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|18730191|gb|BM525737.1|BM525737
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|298172842|gb|HO019826.1|HO019826
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATCTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|298178096|gb|HO027479.1|HO027479
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|298185836|gb|HO030997.1|HO030997
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|9901739|gb|BE610707.1|BE610707
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|207799867|gb|GD768264.1|GD768264
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGAAGCCGTAGCAGCAGCGGGAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|18039968|gb|BM308262.1|BM308262
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|13479334|gb|BG508677.1|BG508677
genomic: AGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|298165950|gb|HO008921.1|HO008921
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|298186477|gb|HO037110.1|HO037110
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|26058865|gb|CA801779.1|CA801779
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|24205206|gb|BU964459.1|BU964459
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|24135604|gb|BU926114.1|BU926114
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: GGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|7232947|gb|AW568298.1|AW568298
genomic: GGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: GGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|18039341|gb|BM307635.1|BM307635
genomic: GGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|193536651|gb|FK491795.1|FK491795
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: CTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|193509200|gb|FK466580.1|FK466580
genomic: CTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|11413001|gb|BF425021.1|BF425021
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: CGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|23727082|gb|BU761559.1|BU761559
genomic: CGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: CCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|4397559|gb|AI496556.1|AI496556
genomic: CCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: GCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|16347113|gb|BI972708.1|BI972708
genomic: GCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: TAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|213596261|gb|DB960218.1|DB960218
genomic: TAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|18040328|gb|BM308622.1|BM308622
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: CAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|298173423|gb|HO016759.1|HO016759
genomic: CAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|208277481|gb|GE079472.1|GE079472
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|298169333|gb|HO020693.1|HO020693
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|208223691|gb|GE020904.1|GE020904
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|15662189|gb|BI699560.1|BI699560
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|298184731|gb|HO029944.1|HO029944
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|6567212|gb|AW234823.1|AW234823
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGEST: gi|213602877|gb|DB972451.1|DB972451
genomic: AGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
EST: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATG GCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
genomic: AGGAGCCGTAGCAGCAGCGGAAGCTCTAGCTTGGGCAGCGAATCACAATGgtgagctttg ... attgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGG
gtttttttaattaatttgtgtctgagctttgaacttcaatatatgattgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT
aattaat putative branch site (score: 3)
tttaattaatttgtgt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaatgctgagttttatttgtttattgttagacttgatattgaaggtttttttaattaatttgtgtctgagctttgaacttcaatatatgattgtaacagGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT
- aatgctg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gtgtctg