Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttagtgcccattctcttcacttttttttttttttttttttatttctattgtcgtattctccattttaactctgatttgtttcttcttcttcttccgtgaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGTCTTTCAGGTCAAGAATGTTGGCAAAACCCTCGTCTCTCGTACCCAGGGA

Basic information

species Glycine max
transcript GLYMA01G44700.1
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA01G44700.1 (Glycine max), 3'ss of exon 1
lower sequence: LOC_Os03g10340.1 (Oryza sativa), 3'ss of exon 1
gttagtgcccattctcttcacttttttttttttttttttttatttctattgtcgtattc-tccattttaactc---------tgatttgtttcttcttcttcttccgtgaatcc-acagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGTCTTTCAGGTCAAGAATGTTGGCAAAACCCTCGTCTCTCGTACCCAGGGA
|| ||||||| | ||   |||  || | |  |  |  |  |  ||  |    |  |  | | |||||| ||||         |   | | || ||  |     |  |    ||   |||||  ||||||||||| |||||||||||||| |||||||||||||| || || ||  | ||   |||  | ||||| |||||||| ||  | || ||||| 
gtgagtgccc-tcctgcccaccgttctctcctcctcctcctgcttagagatccaaaccccttcatttttactcgctagtcgctacatgggttgttgatgcagctttgcatttcttgcagCGTCGATCCCTTTGCTAAGAAGGACTGGTATGATATCAAGGCCCCGTCGGTGTTCAATGTGCGGAACATCGGCAAGACCCTCGTGTCCAGGACACAGGGT

upper sequence: GLYMA01G44700.1 (Glycine max), 3'ss of exon 1
lower sequence: LOC_Os12g21798.1 (Oryza sativa), 3'ss of exon 1
gttagt--gcccattctcttcacttttttttttttttttttttatttctattgtcgtattctccattttaactctgatt-tgtttcttcttcttcttccgtgaatcc-acagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGTCTTTCAGGTCAAGAATGTTGGCAAAACCCTCGTCTCTCGTACCCAGGGA
|| |||   ||  | | |  |||  |  |  |   |  || ||  ||    | | |  | |        |    || |  |||  |||| |  || | |||   ||   |||||  ||||| ||||| |||||||| ||||| |||||||||||||| || || ||  | || |  || || || || || ||||| ||  | || ||||| 
gtgagtttacctctcccccccaccctcctcgtccgtccttcttcctttcgctcttggttgccatggcgcatgggtgttgatgtggcttcctgctcgttcgtttttcttgcagCGTCGATCCTTTTGCGAAGAAGGATTGGTATGATATCAAGGCCCCGTCGGTGTTCAACGTGAGAAACGTCGGGAAGACGCTCGTGTCCAGGACACAGGGC

upper sequence: GLYMA01G44700.1 (Glycine max), 3'ss of exon 1
lower sequence: Vv05s0020g03900.t01 (Vitis vinifera), 3'ss of exon 2
gttagtgcccattctcttcacttttttttttttttttttttatttctattgtcgtattctccattttaactctgatttgtttcttcttcttcttccgtgaatcca--cagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGTCTTTCAGGTCAAGAATGTTGGCAAAACCCTCGTCTCTCGTACCCAGGGA
                     |   |    | |      ||| |   ||| | | |||  || | | ||||    ||  ||  || ||| || |     |||| |  ||| || ||||||||||| |||||||| |||||||| |||||||| ||||| |||||  | ||    ||||| |||||||||||||| || || |||||||| 
--------------------gtgagtgcaatatcacaacttaatcaaatt-ttgaattggccttatcaacttctgttgcttgatttttcatcctgatataatcaatgcagAGCCGATCCCTTTGCAAAGAAGGATTGGTACGACATCAAGGCTCCTTCTGTCTTCGAAGTTCGCAATGTCGGCAAAACCCTCGTTTCCCGCACCCAGGGT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|19453512|gb|BM954922.1|BM954922
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|254343531|gb|GR857287.1|GR857287
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|38193400|gb|CF922606.1|CF922606
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|298168184|gb|HO013447.1|HO013447
EST:     GGAAAGAATAAGAGGTTTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|193637907|gb|FK585751.1|FK585751
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|4397560|gb|AI496557.1|AI496557
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|5058165|gb|AI736641.1|AI736641
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|7232533|gb|AW567888.1|AW567888
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|16348775|gb|BI974370.1|BI974370
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|17153761|gb|BM143694.1|BM143694
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|26060090|gb|CA803004.1|CA803004
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|7233017|gb|AW568368.1|AW568368
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|192332525|gb|FK025630.1|FK025630
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|192328074|gb|FK020377.1|FK020377
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|26058427|gb|CA801341.1|CA801341
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|192332152|gb|FK024598.1|FK024598
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|17400321|gb|BM177103.1|BM177103
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|7685628|gb|AW756276.1|AW756276
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|12690078|gb|BG156414.1|BG156414
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|19269893|gb|BM886149.1|BM886149
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|14126294|gb|BG790732.1|BG790732
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|10847434|gb|BF070121.1|BF070121
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|6502115|gb|AW203488.1|AW203488
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|254337475|gb|GR845152.1|GR845152
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|151393784|gb|EV263659.1|EV263659
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|213599881|gb|DB973911.1|DB973911
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTAGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|7588555|gb|AW704278.1|AW704278
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|213616552|gb|DB967188.1|DB967188
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|8669050|gb|BE190152.1|BE190152
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|5058376|gb|AI736852.1|AI736852
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|31561066|gb|CD486904.1|CD486904
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|213611635|gb|DB969023.1|DB969023
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|298181845|gb|HO026020.1|HO026020
EST:     GGGAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|298182970|gb|HO028233.1|HO028233
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|38192220|gb|CF921426.1|CF921426
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGTAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAAGACTGGTACGATATCAAGGCCCCTTCCCT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|13252116|gb|BG363019.1|BG363019
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCTT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|9901452|gb|BE610420.1|BE610420
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|213595543|gb|DB968507.1|DB968507
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|17153668|gb|BM143601.1|BM143601
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|192318967|gb|FK010587.1|FK010587
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|192295006|gb|FG986725.1|FG986725
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|6913653|gb|AW395183.1|AW395183
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|24136812|gb|BU927322.1|BU927322
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|37995820|gb|CF807409.1|CF807409
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
EST: gi|192325439|gb|FK017195.1|FK017195
EST:     GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGC                         CGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT
genomic: GGAAAGAATAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCgttagtgccc ... gaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtattctccattttaactctgatttgtttcttcttcttcttccgtgaatccacagCGCTGATCCCTTTGCCAAGAAGGACTGGTACGATATCAAGGCCCCTTCCGTCTTTCAGGTCAAGAATGTTGGCAAAACCCTCGTCTCTCGTACCCAGGGA
                      tttgtttcttcttctt  CT-rich tract
         attttaact  TA-rich tract