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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtcattctcattttagcttaattctattatttaggtgcacatcgctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaacagGCATTAAAAGATCGTGACCCTGCTTGTTTGTCGTATTGCTCCGCGCTTTGGTATACGAAG

Basic information

species Glycine max
transcript GLYMA01G36460.1
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA01G36460.1 (Glycine max), 3'ss of exon 1
lower sequence: AT2G17640.1 (Arabidopsis thaliana), 3'ss of exon 2
gtcattctcattttagcttaattctattatttaggtgcacatcgctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaacagGCATTAAAAGATCGTGACCCTGCTTGTTTGTCGTATTGCTCCGCGCTTTGGTATACGAAG
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-------------------------------------------------------------------------------gtaaaacattccacctaatactgtaaaaagacatgatctttgttgttttcttatgtatctcaatgatttgcagGCATTTAAAGATCGTGATCCTGCTTGTCTGTCGTATAGTTCTGCTATTTTACATCTGAAG