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gtgatttctttctctttttgcagaagttactatagtcccccttgtttattgttagttttttttattaaaattacctgcaaatacagGTACAAGTTAATTAAGGAAGTTGGTGATGGGACTTTTGGGAGTGTCTGGAGAGCTATTAATAAGCAAACCGGTGAAGTT
species | Glycine max |
transcript | GLYMA01G35190.3 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TTGTTGAATAAAGGAAGTGCTGCTTTGTGTTCCACGGGAACAATGGAGAG GTACAAGTTAATTAAGGEST: gi|254336468|gb|GR842647.1|GR842647
genomic: TTGTTGAATAAAGGAAGTGCTGCTTTGTGTTCCACGGGAACAATGGAGAGgtgatttctt ... gcaaatacagGTACAAGTTAATTAAGG
EST: TTGTTGAATAAAGGAAGTGCTGCTTTGTGTTCCACGGGAACAATGGAGAG GTACAAGTTAATTAAGGAAGTTGGTGATGGGACTTTTGGGAGTGTCTGGAGEST: gi|254345622|gb|GR855958.1|GR855958
genomic: TTGTTGAATAAAGGAAGTGCTGCTTTGTGTTCCACGGGAACAATGGAGAGgtgatttctt ... gcaaatacagGTACAAGTTAATTAAGGAAGTTGGTGATGGGACTTTTGGGAGTGTCTGGAG
EST: TTGTTGAATAAAGGAAGTGCTGCTTTGTGTTCCACGGGAACAATGGAGAG GTACAAGTTAATTAAGGAAGTTGGTGATGGGACTTTTGGGAGTGTCTGGAGEST: gi|193601702|gb|FK552183.1|FK552183
genomic: TTGTTGAATAAAGGAAGTGCTGCTTTGTGTTCCACGGGAACAATGGAGAGgtgatttctt ... gcaaatacagGTACAAGTTAATTAAGGAAGTTGGTGATGGGACTTTTGGGAGTGTCTGGAG
EST: TTGTTGAATAAAGGAAGTGCTGCTTTGTGTTCCACGGGAACAATGGAGAG GTACAAGTTAATTAAGGAAGTTGGTGATGGGACTTTTGGGAGTGTEST: gi|14205773|gb|BG839451.1|BG839451
genomic: TTGTTGAATAAAGGAAGTGCTGCTTTGTGTTCCACGGGAACAATGGAGAGgtgatttctt ... gcaaatacagGTACAAGTTAATTAAGGAAGTTGGTGATGGGACTTTTGGGAGTGT
EST: GAATAAAGGAAGTGCTGCTTTGTGTTCCACGGGAACAATGGAGAG GTACAAGTTAATTAAGGAAGTTGGTGATGGGACTTTTGGGAGTGTCTGGAGEST: gi|208067113|gb|GD862205.1|GD862205
genomic: GAATAAAGGAAGTGCTGCTTTGTGTTCCACGGGAACAATGGAGAGgtgatttctt ... gcaaatacagGTACAAGTTAATTAAGGAAGTTGGTGATGGGACTTTTGGGAGTGTCTGGAG
EST: GGAACAATGGAGAG GTTACTAAGTTAATTGAGGAAGTTGGTGATGGGACTTTTGGGAGTGTCTGG
genomic: GGAACAATGGAGAGgtgatttctt ... gcaaatacagG-TAC-AAGTTAATTAAGGAAGTTGGTGATGGGACTTTTGGGAGTGTCTGG
atagtcccccttgtttattgttagttttttttattaaaattacctgcaaatacagGTACAAGTTAATTAAGGAAGTTGGTGATGGGACTTTTGGGAGTGTCTGGAGAGCTATTAATAAGCAAACCGGTGAAGTT
ttgtttattgttagtt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtgatttctttctctttttgcagaagttactatagtcccccttgtttattgttagttttttttattaaaattacctgcaaatacagGTACAAGTTAATTAAGGAAGTTGGTGATGGGACTTTTGGGAGTGTCTGGAGAGCTATTAATAAGCAAACCGGTGAAGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA