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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaaggaggggcccagggcgggcttgtggcattcttggtttgaggacttgcaaatgtgggagtaggcctacgaccagccgcaaccccgtgatgtggaccagtgttcaccaaacgcacatttcccgaccgttctactcctgtcgttcggaatgcagGAACAACAACGAGGCACTCAAGCAGTCGACGCGCGCCATCAAGCGTCAATACTCGAAGTTCTTCTAAGCAGCAGGCCATGGCAGAGCGACAACATTGCAG

Basic information

species Chlamydomonas reinhardtii
transcript EDP05903
intron # 8
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|10780116|gb|AV636796.1|AV636796
EST:     ACCAACGGCGACGGGCTAATCGACTACCTGGAGTTCTGCTCCATGCTCCG                         GAACAACAACGAGGCACTCAAGCAGTC
genomic: ACCAACGGCGACGGGCTAATCGACTACCTGGAGTTCTGCTCCATGCTCCGgtaaggaggg ... cggaatgcagGAACAACAACGAGGCACTCAAGCAGTC
EST: gi|161796034|gb|FC082545.1|FC082545
EST:     ACCAACGGCGACGGGCTAATCGACTACCTGGAGTTCTGCTCCATGCTCCG                         GAACAACAACGAGGCACTCAAGCAGTCGACGCGCGCCATCAAGCGTCAATA
genomic: ACCAACGGCGACGGGCTAATCGACTACCTGGAGTTCTGCTCCATGCTCCGgtaaggaggg ... cggaatgcagGAACAACAACGAGGCACTCAAGCAGTCGACGCGCGCCATCAAGCGTCAATA
EST: gi|161807683|gb|FC096417.1|FC096417
EST:     ACCAACGGCGACGGGCTAATCGACTACCTGGAGTTCTGCTCCATGCTCCG                         GAACAACAACGAGGCACTCAAGCAGTCGACGCGCGCCATCAAGCGTCAATA
genomic: ACCAACGGCGACGGGCTAATCGACTACCTGGAGTTCTGCTCCATGCTCCGgtaaggaggg ... cggaatgcagGAACAACAACGAGGCACTCAAGCAGTCGACGCGCGCCATCAAGCGTCAATA
EST: gi|161820226|gb|FC108651.1|FC108651
EST:     ACCAACGGCGACGGGCTAATCGACTACCTGGAGTTCTGCTCCATGCTCCG                         GAACAACAACGAGGCACTCAAGCAGTCGACGCGCGCCATCAAGCGTCAATA
genomic: ACCAACGGCGACGGGCTAATCGACTACCTGGAGTTCTGCTCCATGCTCCGgtaaggaggg ... cggaatgcagGAACAACAACGAGGCACTCAAGCAGTCGACGCGCGCCATCAAGCGTCAATA
EST: gi|9028390|gb|BE238430.1|BE238430
EST:     ACCAACGGCGACGGGCTAATCGACTACCTGGAGTTCTGCTCCATGCTCCG                         GAACAACAACGAGGCACTCAAGCAGTCGACGCGCGCCATCAAGCGTCAATA
genomic: ACCAACGGCGACGGGCTAATCGACTACCTGGAGTTCTGCTCCATGCTCCGgtaaggaggg ... cggaatgcagGAACAACAACGAGGCACTCAAGCAGTCGACGCGCGCCATCAAGCGTCAATA
EST: gi|161793226|gb|FC079568.1|FC079568
EST:     ACCAACGGGGACGGGCTAATGGACTACCTGGAGTTCTGCTCCATGCTCCG                         GAACAACAACGAGGCACTCAAGCAGT
genomic: ACCAACGGCGACGGGCTAATCGACTACCTGGAGTTCTGCTCCATGCTCCGgtaaggaggg ... cggaatgcagGAACAACAACGAGGCACTCAAGCAGT