Skip to another splice site:
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...cgttcccaactccggagcctgaattctgttgcccatcacgacgctaccaaaacgccatcgctaatccgtcctgcccgctcctctctttcgcgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACCAGCTGCGACCTGAAGGAGCTCGTGGCCAAGTTCATCCCCGAGTCCATCG

Basic information

species Chlamydomonas reinhardtii
transcript EDP08964
intron # 5
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EDP08964 (Chlamydomonas reinhardtii), 3'ss of exon 5
lower sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 5
cgttcccaactccggagcctgaattctgttgcccatcacgacgctaccaaaacgccatcgctaatccgtcc-tgcccgctcctctctttcgcgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACCAGCTGCGACCTGAAGGAGCTCGTGGCCAAGTTCATCCCCGAGTCCATCG---------
                |    ||   | |     | || |    ||| |    ||  ||  ||| | |    |   |  |   ||  |    |   |     ||    |||||||||  |||||||  ||||| ||       |||||  |    || ||||| |||||||| ||||||||||||||||| ||| |||| |         
----------------gttacaacattatcat--accatgtgcttactatttggctttctgtaaacagaagattaacattttccttgtaaatgtttcttgattcttgtagATCCGCAGAAAGATGAGTGAGATTATGGTGAAGGAGGCTTCATCTTGTGACCTCAAGGAGCTAGTGGCCAAGTTCATCCCAGAGGCCATTGGAAGAGAGA

upper sequence: EDP08964 (Chlamydomonas reinhardtii), 3'ss of exon 5
lower sequence: EFJ11647 (Selaginella moellendorffii), 3'ss of exon 5
cgttcccaactccggagcctgaattctgttgcccatcacgacgctaccaaaacgccatcgctaatccgtcctgcccgctcctctctttcgcgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACCAGCTGCGACCTGAAGGAGCTCGTGGCCAAGTTCATCCCCGAGTCCATCG---------
                                                        ||   | |   |        | || |   ||   | | |  |   ||   |||||||||||||| |||| |||||||||    ||||||||      |||||| || ||||| ||||| ||||||||||||||||||   || |         
------------------------------------------------------gtatacttgaaaagaaagagttggtcgttcatt--acaaacatcctctctcacagATCCGCAAGAAAATGAGGGAGATCATGGTTCGCGAGGCCCAGTCCTGCGATCTCAAGGACCTCGTCGCCAAGTTCATCCCCGAGGTTATTGGGAAGGAGA

upper sequence: EDP08964 (Chlamydomonas reinhardtii), 3'ss of exon 5
lower sequence: EFJ09804 (Selaginella moellendorffii), 3'ss of exon 5
cgttcccaactccggagcctgaattctgttgcccatcacgacgctaccaaaacgccatcgctaatccgtcctgcccgctcctctctttcgcgacccacagATCCGC---CAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACCAGCTGCGACCTGAAGGAGCTCGTGGCCAAGTTCATCCCCGAGTCCATCG---------
                                                           |   |   |    |   |       | |||   ||  ||| |  | |   |||||||||||||| |||| |||||||||    ||||||||      |||||| || ||||| ||||| ||||||||||||||||||   || |         
-----------------------------------------------------------gtatacttgaaaagaaagagttggccgttcattacaaacatactctcgcacagATCCGCAAGAAAATGAGGGAGATCATGGTTCGCGAGGCCCAGTCCTGCGATCTCAAGGACCTCGTCGCCAAGTTCATCCCCGAGGTTATTGGGAAGGAGA

upper sequence: EDP08964 (Chlamydomonas reinhardtii), 3'ss of exon 5
lower sequence: EFJ09763 (Selaginella moellendorffii), 3'ss of exon 5
cgttcccaactccggagcctgaattctgttgcccatcacgacgctaccaaaacgccatcgctaatccgtcctgcccgctcctctctttcgcgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACCAGCTGCGACCTGAAGGAGCTCGTGGCCAAGTTCATCCCCGAGTCCATCG---------
                                                     |    |   ||        |   |||  ||   ||  | | |      ||   |||||||||||||| |||| |||||||||    ||||||||      |||||| || ||||| ||||| ||||||||||||||||||   || |         
-----------------------------------------------------gtacacttgaaaagaaagagtttgctgttca--ttaacaaacatgctctcgtacagATCCGCAAGAAAATGAGGGAGATCATGGTTCGCGAGGCCCAGTCCTGCGATCTCAAGGACCTCGTCGCCAAGTTCATCCCCGAGGTTATTGGGAAGGAGA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|23365480|gb|BU653300.1|BU653300
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|10783024|gb|AV639696.1|AV639696
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|6551856|gb|AV397640.1|AV397640
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGGCA-GAAGATGATGGGGGTCATCACCCGCGGAGGCGA
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCG-CAAGAAGATGATGGAGATCATCACCCGCG-AGGCGA
EST: gi|6545237|gb|AV391021.1|AV391021
EST:     AGAAGCGCCAGG-CCAGATCAAGCGC-CCTGCTACGCC-AGAGCGCGCAG                         ATCCGC--GATCCGCA-GAAGATG-TG-AGATC-TCACC-GCGAG-CGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|22064396|gb|BQ815782.1|BQ815782
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|10773397|gb|AV624220.1|AV624220
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATACGACAGATCCGCAAGAAGATGATGGAGATCATCA
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCA
EST: gi|161820374|gb|FC108695.1|FC108695
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|10785215|gb|AV641887.1|AV641887
EST:     GATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: GATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|161823693|gb|FC109577.1|FC109577
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|6542057|gb|AV387841.1|AV387841
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|161815529|gb|FC104868.1|FC104868
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|22076174|gb|BQ824950.1|BQ824950
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGTCAGATCCGCAAGAATATGATGGAGATCATCACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACC
EST: gi|6545360|gb|AV391144.1|AV391144
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGNCAGATCCCGCA-GAAGATGATGGAGATCATCACCCG
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCC-GCAAGAAGATGATGGAGATCATCACCCG
EST: gi|15700237|gb|BI724542.1|BI724542
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCC
EST: gi|9459798|gb|BE452914.1|BE452914
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGATGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|161818692|gb|FC105193.1|FC105193
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|161816056|gb|FC103777.1|FC103777
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|161815877|gb|FC103461.1|FC103461
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|23361489|gb|BU649309.1|BU649309
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|23363616|gb|BU651436.1|BU651436
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|10770417|gb|AV621242.1|AV621242
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATC
EST: gi|22074652|gb|BQ823559.1|BQ823559
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|15697489|gb|BI721794.1|BI721794
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|15693346|gb|BI717651.1|BI717651
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|6546231|gb|AV392015.1|AV392015
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGA
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGA
EST: gi|6540749|gb|AV386533.1|AV386533
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATG
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATG
EST: gi|161817133|gb|FC101580.1|FC101580
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|6544459|gb|AV390243.1|AV390243
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|9460250|gb|BE453138.1|BE453138
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGGCAGATCCGCATGAAGATGATGGAGATCATCACCCGCCAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|9210417|gb|BE337332.1|BE337332
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|6545008|gb|AV390792.1|AV390792
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|16432432|gb|BI997658.1|BI997658
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|23362413|gb|BU650233.1|BU650233
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|9028006|gb|BE238046.1|BE238046
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|15699705|gb|BI724010.1|BI724010
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|6541839|gb|AV387623.1|AV387623
EST:     AGAAGCGCCAGTGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATACGACAGATCCGCA-GAAGATGATGGAAATC-TCACCGG-GAAGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|6540933|gb|AV386717.1|AV386717
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATACGCCAGATC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATC
EST: gi|10781329|gb|AV638009.1|AV638009
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCC
EST: gi|6545539|gb|AV391323.1|AV391323
EST:     AGAAGCGCCAGG-CCAGATCAAGCGCACCTGCTA-GCCCAGAGCGCGCAG                         ATCCGC-AGATCCGCA-GA-GATGATGG-GATCATC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATC
EST: gi|6546267|gb|AV392051.1|AV392051
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGGGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGATGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|6548317|gb|AV394101.1|AV394101
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|22073034|gb|BQ822244.1|BQ822244
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACTCCCAGAGCGCGCAG                         ATCCGGCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGG
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGG
EST: gi|161817411|gb|FC104939.1|FC104939
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|6541306|gb|AV387090.1|AV387090
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|10775449|gb|AV632129.1|AV632129
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCAACTGATACGCCCAGAGCGCGCAG                         ATACGCCAGATCCGCAAG
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAG
EST: gi|22059504|gb|BQ813464.1|BQ813464
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|6546223|gb|AV392007.1|AV392007
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGAAC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|10774608|gb|AV625431.1|AV625431
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCAACACCCGCGAGGCGA
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGA
EST: gi|161821993|gb|FC110301.1|FC110301
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|161809824|gb|FC094671.1|FC094671
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|161810959|gb|FC094421.1|FC094421
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|23364276|gb|BU652096.1|BU652096
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|15703636|gb|BI727941.1|BI727941
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAA                         ATCCGCCAGATCCGCAAGAAGATGATGGAG
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAG
EST: gi|23363632|gb|BU651452.1|BU651452
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|9441319|gb|BE441682.1|BE441682
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|22059793|gb|BQ813573.1|BQ813573
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCANGAAGATGATGGGAGATCATCACCCGCGAGGCGAC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGG-AGATCATCACCCGCGAGGCGAC
EST: gi|22075429|gb|BQ824205.1|BQ824205
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATTACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|10127473|gb|BE726177.1|BE726177
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCAT
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCAT
EST: gi|161823841|gb|FC109608.1|FC109608
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|161810655|gb|FC096821.1|FC096821
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|6543393|gb|AV389177.1|AV389177
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATACGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGC
EST: gi|6551640|gb|AV397424.1|AV397424
EST:     AAAAGCGCCAGCGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGGGATC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|161811903|gb|FC096093.1|FC096093
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|6546937|gb|AV392721.1|AV392721
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGACAGATCCGCAAGAAGATGATGGAGAT
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGAT
EST: gi|16071731|gb|BI873727.1|BI873727
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCCAGAAGATGATGGAGATCATCACCCGCGAGGCGA
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGA
EST: gi|6544366|gb|AV390150.1|AV390150
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGACAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAAGCGAAC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|22067059|gb|BQ817315.1|BQ817315
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGNCAGATCCGNAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|161804409|gb|FC092728.1|FC092728
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|22054311|gb|BQ811300.1|BQ811300
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|161794527|gb|FC081948.1|FC081948
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|8286768|gb|BE024327.1|BE024327
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|9210810|gb|BE337725.1|BE337725
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|22054202|gb|BQ811216.1|BQ811216
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGAATGATGGAGATCATCACCCGCGAGGCGAC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGA-TGATGGAGATCATCACCCGCGAGGCGAC
EST: gi|8286854|gb|BE024413.1|BE024413
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGTAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|23364106|gb|BU651926.1|BU651926
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|10775943|gb|AV632623.1|AV632623
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|22072234|gb|BQ821572.1|BQ821572
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACC
EST: gi|6545430|gb|AV391214.1|AV391214
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGA
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGA
EST: gi|22062125|gb|BQ814634.1|BQ814634
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACC
EST: gi|6551595|gb|AV397379.1|AV397379
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCGAGAAGATGATGGGGATCATCACCCGCGAGGCGAAC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|22070503|gb|BQ819836.1|BQ819836
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|9028220|gb|BE238260.1|BE238260
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGNCA-GAAGATGATGGAGATCATCACCC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCG-CAAGAAGATGATGGAGATCATCACCC
EST: gi|22073307|gb|BQ822645.1|BQ822645
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|161804433|gb|FC092739.1|FC092739
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|23361960|gb|BU649796.1|BU649796
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|23364568|gb|BU652388.1|BU652388
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|22074455|gb|BQ823462.1|BQ823462
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|6546078|gb|AV391862.1|AV391862
EST:     AGAAGCGCCAAGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGA-GATGATGGAGATCATC-CCCGCGAGGCGAC-
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|22068568|gb|BQ818452.1|BQ818452
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|161793095|gb|FC078085.1|FC078085
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|6551988|gb|AV397772.1|AV397772
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATG
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATG
EST: gi|6546470|gb|AV392254.1|AV392254
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACC
EST: gi|6546479|gb|AV392263.1|AV392263
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCG
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCG
EST: gi|6547503|gb|AV393287.1|AV393287
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGA
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGA
EST: gi|6541865|gb|AV387649.1|AV387649
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGGCAGATCCGCAAGAAGATGATGGAGATCATCACCCGGGAAGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|22055370|gb|BQ811783.1|BQ811783
EST:     GAAGCGCCAGGGCCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGGAGATCATCACCCGCGAGGCGAC
genomic: GAAGCGCCAGGGCC-AGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGG-AGATCATCACCCGCGAGGCGAC
EST: gi|6545267|gb|AV391051.1|AV391051
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACC-GCGGAG-CGAC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCG-AGGCGAC
EST: gi|161799842|gb|FC087820.1|FC087820
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|10774583|gb|AV625406.1|AV625406
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGAT
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGAT
EST: gi|7686877|gb|AW757525.1|AW757525
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|16073173|gb|BI875169.1|BI875169
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|6546161|gb|AV391945.1|AV391945
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|22075650|gb|BQ824426.1|BQ824426
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|6544431|gb|AV390215.1|AV390215
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGATGCGAAC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|6546679|gb|AV392463.1|AV392463
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|16072683|gb|BI874679.1|BI874679
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|10782638|gb|AV639310.1|AV639310
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|6544782|gb|AV390566.1|AV390566
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACC
EST: gi|6540698|gb|AV386482.1|AV386482
EST:     AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAG                         ATCCGCCAGATCCGCAAGAAGATGATGG
genomic: AGAAGCGCCAGGGCCAGATCAAGCGCACCTGCTACGCCCAGAGCGCGCAGgtgcggacgg ... cgacccacagATCCGCCAGATCCGCAAGAAGATGATGG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

accaaaacgccatcgctaatccgtcctgcccgctcctctctttcgcgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACCAGCTGCGACCTGAAGGAGCTCGTGGCCAAGTTCATCCCCGAGTCCATCG
             cgctaat  putative branch site (score: 3)
                   tccgtcctgcccgctc  CT-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
cgttcccaactccggagcctgaattctgttgcccatcacgacgctaccaaaacgccatcgctaatccgtcctgcccgctcctctctttcgcgacccacagATCCGCCAGATCCGCAAGAAGATGATGGAGATCATCACCCGCGAGGCGACCAGCTGCGACCTGAAGGAGCTCGTGGCCAAGTTCATCCCCGAGTCCATCG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGCT
- - - - - - - - - - - -ttctgtt
- - - - - - - - - - - - - - - - ccatcac
- - - - - - - - - - - - - - - - - - - - - - -accaaaa