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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacggtgatcgtaggaaggcaacgccatgatttggcttgtggcccttatgtcttcataataagctcaccatgtacgtgcatgccgcgctactccttcccacatgcagTATCGCTCGGGCAATGGAGGCGCCGCCACGGCAGCTCGCATCCGCTCCGGCATCATTGCTGACCTCTCAGCCGCCTATCTGCCCCTGGTGCCGCGCATTC

Basic information

species Chlamydomonas reinhardtii
transcript EDO97766
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttcataataagctcaccatgtacgtgcatgccgcgctactccttcccacatgcagTATCGCTCGGGCAATGGAGGCGCCGCCACGGCAGCTCGCATCCGCTCCGGCATCATTGCTGACCTCTCAGCCGCCTATCTGCCCCTGGTGCCGCGCATTC
         agctcac  putative branch site (score: 3)
                                 cgctactccttccc  putative PPT
     aataa  TA-rich tract