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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...atataaagcagttatgcattaagcaatatttatattcccgtcaggggatggcttaatagattaacggagatagtctagcgagctatcttgaacataaatgATCTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCAGAACACAACATCCTTATGCACCCATTCCACATGTTAGGTGTTGCTGGTGTATTCGGTGGTT

Basic information

species Chlamydomonas reinhardtii
transcript DAA00957
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ggatggcttaatagattaacggagatagtctagcgagctatcttgaacataaatgATCTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCAGAACACAACATCCTTATGCACCCATTCCACATGTTAGGTGTTGCTGGTGTATTCGGTGGTT
             gattaac  putative branch site (score: 2)
       ttaatagattaa  TA-rich tract