1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' | 26 5' 3' | 27 5' 3' | 28 5' 3' |
gtgagtgtggtggttgtcggtggtggttgtggtgccggacagctagctgctcgcagctagctgcgagcgagtgggaacgtggccacatcaacaacttgtacggcggcccggccgtgtttctgacacgcttgccctgacctctgtccttgcctcgcccctcctccccttggccttccactcgcagCCGGCACCGCGCTGGCGCTGCGCAACGCGGGCGTGCCGTGCGAGCAGGTGTTCAAGATCCAGGAGGGCCGTCCCAACCCCGCCGACCTCATGCGCAACGG
species | Chlamydomonas reinhardtii |
transcript | EDO96236 |
intron # | 26 |
splice site | 3' |
intron type | U2 |
EST: CGAGATTGCGCGCAACCTGGGCAACCTGNGCTTCGGCCTGGTGGCCACAA CCGGCACCGCGCTGGCGCTGCGCAACGCGGGCGTGCCGTGCGAGCAGGTGTEST: gi|16072340|gb|BI874336.1|BI874336
genomic: CGAGATTGCGCGCAACCTGGGCAACCTGGGCTTCGGCCTGGTGGCCACAAgtgagtgtgg ... ccactcgcagCCGGCACCGCGCTGGCGCTGCGCAACGCGGGCGTGCCGTGCGAGCAGGTGT
EST: CGAGATTGCGCGCAACCTGGGCAACCTGGGCTTCGGCCTGGTGGCCACAA CCGGCACCGCGCTGGCGCTGCGCAACGCGGGCGTGCCGTGCGAGCAGGTGTEST: gi|6541372|gb|AV387156.1|AV387156
genomic: CGAGATTGCGCGCAACCTGGGCAACCTGGGCTTCGGCCTGGTGGCCACAAgtgagtgtgg ... ccactcgcagCCGGCACCGCGCTGGCGCTGCGCAACGCGGGCGTGCCGTGCGAGCAGGTGT
EST: CGAGATTGCGCGCAACCTGGGCAACCTGGGCTTCGGCCTGGTGGCCACAA CCGGCACCGCGCTGGCGCTGCGCAACGCGGGCGTGCCGTGCGAGCAGGTGTEST: gi|22050261|gb|BQ809152.1|BQ809152
genomic: CGAGATTGCGCGCAACCTGGGCAACCTGGGCTTCGGCCTGGTGGCCACAAgtgagtgtgg ... ccactcgcagCCGGCACCGCGCTGGCGCTGCGCAACGCGGGCGTGCCGTGCGAGCAGGTGT
EST: CGAGATTGCGCGCAACCTGGGCAACCTGGGCTTCGGCCTGGTGGCCACAA CCGGCACCGCGCTGGCGCTGCGCAACGCGGGCGTGCCGTGCGAGCAGGTGTEST: gi|22050262|gb|BQ809153.1|BQ809153
genomic: CGAGATTGCGCGCAACCTGGGCAACCTGGGCTTCGGCCTGGTGGCCACAAgtgagtgtgg ... ccactcgcagCCGGCACCGCGCTGGCGCTGCGCAACGCGGGCGTGCCGTGCGAGCAGGTGT
EST: CGAGATTGCGCGCAACCTGAGCAACCTGGGCTTCGGCCTGGTGGCCACAA CCGGCACCGCGCTGGCGCTGCGCAACGCGGGCGTGCCGTGCGAGCAGGTGTEST: gi|34987423|gb|CF561340.1|CF561340
genomic: CGAGATTGCGCGCAACCTGGGCAACCTGGGCTTCGGCCTGGTGGCCACAAgtgagtgtgg ... ccactcgcagCCGGCACCGCGCTGGCGCTGCGCAACGCGGGCGTGCCGTGCGAGCAGGTGT
EST: CGAGATTGCGCGCAACCTGGGCAACCTGGGCTTCGGCCTGGTGGCCACAA CCGGCACCGCGCTGGCGCTGCGCAACGCGGGCGTGCCGTGCGAGCAGGTGTEST: gi|8933132|gb|BE227893.1|BE227893
genomic: CGAGATTGCGCGCAACCTGGGCAACCTGGGCTTCGGCCTGGTGGCCACAAgtgagtgtgg ... ccactcgcagCCGGCACCGCGCTGGCGCTGCGCAACGCGGGCGTGCCGTGCGAGCAGGTGT
EST: CGAGATTGCGCGCAACCTGGGCAACCTGGGCTTCGGCCTGGTGGCCACAA CCGGCACCGCGCTGGCGCTGCGCAACGCGGGCGTGCCGTGCGAGCAGGTGT
genomic: CGAGATTGCGCGCAACCTGGGCAACCTGGGCTTCGGCCTGGTGGCCACAAgtgagtgtgg ... ccactcgcagCCGGCACCGCGCTGGCGCTGCGCAACGCGGGCGTGCCGTGCGAGCAGGTGT
tgccctgacctctgtccttgcctcgcccctcctccccttggccttccactcgcagCCGGCACCGCGCTGGCGCTGCGCAACGCGGGCGTGCCGTGCGAGCAGGTGTTCAAGATCCAGGAGGGCCGTCCCAACCCCGCCGACCTCATGCGCAACGG
ccctgac putative branch site (score: 3)
cctctgtccttgcctc CT-rich tract