Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tgtcagccgcagccatccatgccctgcgcacctcagcatgtcatgtgctctgaccttgggttgtcggctttgctcggttgctcttcctcccgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTGAAGAAGATCCGCAACCACCGCGGTCTGCGCCACTACTGGGGCCTGCGCG

Basic information

species Chlamydomonas reinhardtii
transcript EDP08449
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EDP08449 (Chlamydomonas reinhardtii), 3'ss of exon 2
lower sequence: GRMZM2G130544_T02 (Zea mays), 3'ss of exon 3
tgtcagccgca-gccatccatgccctgcgcacctcagcatgtcatgtgctctgaccttgggttgtcggctttgctcggttgctcttcctcccgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTGAAGAAGAT-CCGCAACCACCGCGGTCTGCGC---CACTACTGGGGCCTGCGCG---
 |||    |    |  || |  | || |   | |  ||||      | |  ||| |||   || |||   | || | |    ||    |        |   |||       | | | ||| |  |||||    ||  | |   | |  | ||   |  |  ||   || || |      | |     ||   ||| | || |  |   
-gtccattgtgcactgtctacactctacattctt--gcatcgagaataca-tgatctta--ttatcgtagtagcccagaccttcagatttttaatttgtt-ctgcagGAACCACCG-TGGTCTGCGTCACTACTGGGGCCTCCGCGTCCGTGGCCAGCACACCAAGACTACTGGTAGGCGTGGAAAGACCGTTGGTGTCTCCAAGAAG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22065827|gb|BQ816593.1|BQ816593
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|6550528|gb|AV396312.1|AV396312
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|34983355|gb|CF557272.1|CF557272
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|7426956|gb|AW661129.1|AW661129
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|22052356|gb|BQ810195.1|BQ810195
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|34989710|gb|CF563627.1|CF563627
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|22070067|gb|BQ819506.1|BQ819506
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|161793449|gb|FC077321.1|FC077321
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|34994087|gb|CF568004.1|CF568004
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTTGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|7413370|gb|AW652124.1|AW652124
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|34993659|gb|CF567576.1|CF567576
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|6549905|gb|AV395689.1|AV395689
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|6551174|gb|AV396958.1|AV396958
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|161824164|gb|FC110945.1|FC110945
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCCCAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|22066583|gb|BQ817009.1|BQ817009
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|34990135|gb|CF564052.1|CF564052
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|22052359|gb|BQ810196.1|BQ810196
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|10793485|gb|AV630851.1|AV630851
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|22053029|gb|BQ810552.1|BQ810552
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|10784995|gb|AV641667.1|AV641667
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|161808615|gb|FC094892.1|FC094892
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|6549120|gb|AV394904.1|AV394904
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|161824165|gb|FC110946.1|FC110946
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|22052365|gb|BQ810198.1|BQ810198
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|10787183|gb|AV643855.1|AV643855
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|7616078|gb|AW721518.1|AW721518
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|34981977|gb|CF555894.1|CF555894
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|6550257|gb|AV396041.1|AV396041
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|16072131|gb|BI874127.1|BI874127
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|10786150|gb|AV642822.1|AV642822
EST:     CTGGTTCCTGAACAGGCAGAAGAGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: CTGGTTCCTGAACAGGCAGAAG-GACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|22052368|gb|BQ810199.1|BQ810199
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|161822693|gb|FC106250.1|FC106250
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|7426915|gb|AW661088.1|AW661088
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|9461073|gb|BE453551.1|BE453551
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|6549611|gb|AV395395.1|AV395395
EST:     ACGGGTTCCTGAACAGGCAGTTTGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|16072069|gb|BI874065.1|BI874065
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|34990134|gb|CF564051.1|CF564051
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|6544165|gb|AV389949.1|AV389949
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|161812671|gb|FC095614.1|FC095614
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTTGTAGCAGCTGGACACCGTCTTGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|6549109|gb|AV394893.1|AV394893
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|22065826|gb|BQ816592.1|BQ816592
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|22066582|gb|BQ817008.1|BQ817008
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|34984211|gb|CF558128.1|CF558128
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|34988379|gb|CF562296.1|CF562296
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|22052362|gb|BQ810197.1|BQ810197
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|8828332|gb|BE212062.1|BE212062
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|10126363|gb|BE725067.1|BE725067
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|10786441|gb|AV643113.1|AV643113
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|34993292|gb|CF567209.1|CF567209
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACCCCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|9210679|gb|BE337594.1|BE337594
EST:     TGGTTCCTGATCTTTTCTGTAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: TGGTTCCTGAAC-AGGCAG-AAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|161805588|gb|FC090644.1|FC090644
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         TTGACCTCGTCGCAGCTGGACACCGTCTTGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|49469625|gb|BP097486.1|BP097486
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|34987457|gb|CF561374.1|CF561374
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|34992190|gb|CF566107.1|CF566107
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGGCGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGGTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|10782608|gb|AV639280.1|AV639280
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|161807111|gb|FC089306.1|FC089306
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|6541052|gb|AV386836.1|AV386836
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|22060385|gb|BQ813778.1|BQ813778
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|22067565|gb|BQ817638.1|BQ817638
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|34989711|gb|CF563628.1|CF563628
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|49470493|gb|BP098354.1|BP098354
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|34993727|gb|CF567644.1|CF567644
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|22053030|gb|BQ810553.1|BQ810553
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|10775469|gb|AV632149.1|AV632149
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|34994664|gb|CF568581.1|CF568581
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTTGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCCCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|15372144|gb|BI531570.1|BI531570
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|10125770|gb|BE724474.1|BE724474
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|6547977|gb|AV393761.1|AV393761
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|7615804|gb|AW721244.1|AW721244
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|22051648|gb|BQ809760.1|BQ809760
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|6550549|gb|AV396333.1|AV396333
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|22076854|gb|BQ825630.1|BQ825630
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|6548290|gb|AV394074.1|AV394074
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|161801862|gb|FC093727.1|FC093727
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTTGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|34989709|gb|CF563626.1|CF563626
EST:     ACTGGTTCCTGTTCAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|161820301|gb|FC108674.1|FC108674
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|34992191|gb|CF566108.1|CF566108
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|34994786|gb|CF568703.1|CF568703
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|6548648|gb|AV394432.1|AV394432
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|161822692|gb|FC106249.1|FC106249
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTTGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|10126828|gb|BE725532.1|BE725532
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|6549702|gb|AV395486.1|AV395486
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|14228414|gb|BG847230.1|BG847230
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|161800490|gb|FC086752.1|FC086752
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|34981976|gb|CF555893.1|CF555893
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCCCAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|161808614|gb|FC094891.1|FC094891
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|22065825|gb|BQ816591.1|BQ816591
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|161820300|gb|FC108673.1|FC108673
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTTGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
EST: gi|14228413|gb|BG847229.1|BG847229
EST:     ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAG                         CTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG
genomic: ACTGGTTCCTGAACAGGCAGAAGGACCACAAGACGGGCCGCTTCAGCCAGgtccgtgcgg ... cgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgctctgaccttgggttgtcggctttgctcggttgctcttcctcccgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTGAAGAAGATCCGCAACCACCGCGGTCTGCGCCACTACTGGGGCCTGCGCG
  ctctgac  putative branch site (score: 3)
                                ttgctcttcctcccgc  putative PPT
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
tgtcagccgcagccatccatgccctgcgcacctcagcatgtcatgtgctctgaccttgggttgtcggctttgctcggttgctcttcctcccgccccgcagCTGACCTCGTCGCAGCTGGACACCGTCATGCGTGACGACCTGGAGCGCCTGAAGAAGATCCGCAACCACCGCGGTCTGCGCCACTACTGGGGCCTGCGCG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - agccgca
- - - - - - -catccat
- - - - - - - - - - - - tgcgcac
- - - - - - - - - - - - - - - - - - - - - atgtgct
- - - - - - - - - - - - - - - - - - - - - - - - - - - -ttgggtt