Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagcgcggcggtggcggggtctgcgggcgcagagcttgattctcaggatgccgtcctaattatttcatatgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAGTGCATCTTCCTGTTCGGCTTCCGCACCCAG

Basic information

species Chlamydomonas reinhardtii
transcript EDP07861
intron # 2
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|34990273|gb|CF564190.1|CF564190
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGGGAACGTGTCCAAG                         AGCGAACTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34993205|gb|CF567122.1|CF567122
EST:     ATTATTGACGTGCTGCCCCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|49470188|gb|BP098049.1|BP098049
EST:     ATTATNTGACGTGCTGCACCCCGGGCCCCGGGCGAACGTGTCCANAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCA
genomic: ATTAT-TGACGTGCTGCA-CCCGGG--CCGGGCGAACGTGTCCA-AGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCA
EST: gi|22074992|gb|BQ823768.1|BQ823768
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22048698|gb|BQ808334.1|BQ808334
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34991436|gb|CF565353.1|CF565353
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22064081|gb|BQ815610.1|BQ815610
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGC
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGC
EST: gi|22070885|gb|BQ820223.1|BQ820223
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22064119|gb|BQ815625.1|BQ815625
EST:     ATTATTGACGTGCTGCACCCGGGCCGGTCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34988333|gb|CF562250.1|CF562250
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34992755|gb|CF566672.1|CF566672
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22073687|gb|BQ823025.1|BQ823025
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34991766|gb|CF565683.1|CF565683
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22064082|gb|BQ815611.1|BQ815611
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|161813085|gb|FC101384.1|FC101384
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22050946|gb|BQ809427.1|BQ809427
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22055045|gb|BQ811657.1|BQ811657
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34988334|gb|CF562251.1|CF562251
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22072659|gb|BQ821997.1|BQ821997
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22050940|gb|BQ809425.1|BQ809425
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34981031|gb|CF554948.1|CF554948
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34990274|gb|CF564191.1|CF564191
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22072357|gb|BQ821695.1|BQ821695
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22071099|gb|BQ820437.1|BQ820437
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|8514457|gb|BE122352.1|BE122352
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22065622|gb|BQ816453.1|BQ816453
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22053108|gb|BQ810595.1|BQ810595
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGCCGCCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22068886|gb|BQ818645.1|BQ818645
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|6551543|gb|AV397327.1|AV397327
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34985612|gb|CF559529.1|CF559529
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34993208|gb|CF567125.1|CF567125
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|4662690|gb|AI625890.1|AI625890
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34988144|gb|CF562061.1|CF562061
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34985559|gb|CF559476.1|CF559476
EST:     GGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: GGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34989143|gb|CF563060.1|CF563060
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCCTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34990940|gb|CF564857.1|CF564857
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34992736|gb|CF566653.1|CF566653
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34992735|gb|CF566652.1|CF566652
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34991435|gb|CF565352.1|CF565352
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22069690|gb|BQ819228.1|BQ819228
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22050943|gb|BQ809426.1|BQ809426
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|4766447|gb|AI662864.1|AI662864
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22067087|gb|BQ817333.1|BQ817333
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22067548|gb|BQ817624.1|BQ817624
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCG
EST: gi|161795398|gb|FC078555.1|FC078555
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34985613|gb|CF559530.1|CF559530
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22071098|gb|BQ820436.1|BQ820436
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|49469141|gb|BP097002.1|BP097002
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34988142|gb|CF562059.1|CF562059
EST:     ATTATTGACGTGCTGCCCCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34990275|gb|CF564192.1|CF564192
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34988105|gb|CF562022.1|CF562022
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34985581|gb|CF559498.1|CF559498
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|161821895|gb|FC107603.1|FC107603
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22077074|gb|BQ825850.1|BQ825850
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34985580|gb|CF559497.1|CF559497
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAACTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|22074993|gb|BQ823769.1|BQ823769
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|161808269|gb|FC095924.1|FC095924
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34990259|gb|CF564176.1|CF564176
EST:     ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: ATTATTGACGTGCTGCACCCGGGCCGGGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
EST: gi|34985558|gb|CF559475.1|CF559475
EST:     GGCGAACGTGTCCAAG                         AGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG
genomic: GGCGAACGTGTCCAAGgtgagcgcgg ... atgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cgggcgcagagcttgattctcaggatgccgtcctaattatttcatatgtttgcagAGCGAGCTGGCGGAGAAGCTGTCGTCCATGTATGAGGTCAAGGACTCGCAGTGCATCTTCCTGTTCGGCTTCCGCACCCAG
                              tcctaat  putative branch site (score: 2)
                                 taattatttcatatgt  TA-rich tract